| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1888 |
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| Symbol | |
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| ID | 8544270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2597632 |
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| End bp | 2599221 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386593 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003266328 |
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| Protein GI | 262195119 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTCCT TATCCAACGG GATCAAGGTC GGCATCCTCT TCGTCGTGAT GGTGCTCGGC
ACCTACGGCG TGTGGTCGGC CGTGACCGCG CCCTCGAGCG GCGAGAAGAG CTTCGAGCTC
GGCGCCATGT TCCGCGACGC CTCGGGCCTG CCCAAGGGCT CGCGCGTGGT CGTCGCCGGT
CTGCCGGTGG GCGAGATCAT CGACCTCGAC ATCGAGGGCC GCTACGCGCG CATCGGCTTC
CGCGTGCGCG AGGATCTGCC GGTCTGGTCC AACGCCATCG TGTTCAAGAA GTCATCGTCG
CTGCTCGGCG ACTACTACCT CGAGCTCGAC CCGGGCACGC CCGAGGCCCT GGACGCCACG
GGCAACATCG TCACCAACAC CCGCCTGGGC GCGGATGACA CCGTGGCCAC CGTGGTCGAG
GCGACCTCGC CCGACGAGCT GCTGCGCCGC ATCGACGAGA GCATGCCCAA CGTGGACAAC
GTGCTGCTGT CGGTGCGCGA CCTGAGCGAG GATCTGCGCC GCGTGGTCAA CGGCCCGCTG
CTGTCGGTGA GCGAGCGCAT CGACGGCCTG GTGCAGACCG AGTCCGAGAC CGTGGCCCGC
ATCCTCGAGC GCCTCGACCG CAGCATGGTC AATATCCAGG CCATCACCAA TGACGTCCGC
GACATCACGG GCGGCCGCAA CTCGCAGATC GACCGCATCC TCGAGGAGCT GGAGGCGGCC
TCGAGCGAGG CCCGCAACCT GGTGGTGAGC GCGCGTACCG AGGTCGAGCA GACCGGCTCG
AAGGTGCGCG AGAAGCTCGA CATGGTCGAC GACATCATGG CCAACACCAG CTCGATCACG
GGCAAGATCG ACGAGGACGA GGGCACGCTC GGCCGCCTGG TCAACGACCC GACGATCGCC
GACAACGTCG AGGACATCAC CGAGGACGCC AAGGGCTTCC TCGACGGCCT GCTCAACCTG
CAGACCTACG TGGGCCTGCG CTCCGAGTAC ACGGTCGGCT CGGGCTCGCT GCGCAGCTAC
GTGTCGCTCG AGCTGGCGCC GCGTCCCGAC AAGTACTACC TCATCGAGCT GGCCAAGGGA
CCGCGCGGCG GTCTGCCCGA GGTCAGCCTG ATCTACGACC CGTCGATGAA CGACAGCCAG
TACCTGCGCC GGGTGACCAT CGAGGACGAG ATCCGCTTCA CCTTCCAGCT CGCCAAGCGG
CTGAGCTGGG CGACGCTGCG CTACGGCCTC AAGGAATCCA CGGGCGGCGT CGGCCTCGAT
TTCAACGGCG AATGGTTTGG TCGCGAGCTG ACGCTGCAGA CCGACGTGTT CGACGCCAGC
TTCGACCGCC TGCCGCGGCT CAAGGTCTCG GCCGCGTACG AGTTCCTGCC GTACATCTAC
GTGCTCGGCG GCATCGACGA CGCCATGAAC GCGCCCGGCT ACCTGCCGAT CACGCCGGGG
CCGGACGAGG GCCTCGAGCG GCCGATGCTG TTCGACGAGC TGCGCTATGG TCGCGACTTC
TTCGTGGGCG CGATGCTTCG CTTCAACGAT CGCGACCTCG CGGCGCTGTT CACGGTGGCC
GGTTCGGCGG CCGGCGCGGC GCTCGAGTAA
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| Protein sequence | MKSLSNGIKV GILFVVMVLG TYGVWSAVTA PSSGEKSFEL GAMFRDASGL PKGSRVVVAG
LPVGEIIDLD IEGRYARIGF RVREDLPVWS NAIVFKKSSS LLGDYYLELD PGTPEALDAT
GNIVTNTRLG ADDTVATVVE ATSPDELLRR IDESMPNVDN VLLSVRDLSE DLRRVVNGPL
LSVSERIDGL VQTESETVAR ILERLDRSMV NIQAITNDVR DITGGRNSQI DRILEELEAA
SSEARNLVVS ARTEVEQTGS KVREKLDMVD DIMANTSSIT GKIDEDEGTL GRLVNDPTIA
DNVEDITEDA KGFLDGLLNL QTYVGLRSEY TVGSGSLRSY VSLELAPRPD KYYLIELAKG
PRGGLPEVSL IYDPSMNDSQ YLRRVTIEDE IRFTFQLAKR LSWATLRYGL KESTGGVGLD
FNGEWFGREL TLQTDVFDAS FDRLPRLKVS AAYEFLPYIY VLGGIDDAMN APGYLPITPG
PDEGLERPML FDELRYGRDF FVGAMLRFND RDLAALFTVA GSAAGAALE
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