Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1881 |
Symbol | |
ID | 8544263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2590233 |
End bp | 2591894 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646386586 |
Product | serine/threonine protein kinase with TPR repeats |
Protein accession | YP_003266321 |
Protein GI | 262195112 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.211563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.848912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGG CGCGGGTTCG CGATATCCTA GCGCCCGTGA GCGACGACCG CATCGGCAGC GAGCTCGACG GCCGCTATCG CATCCAGGAC AAGCTGGGCG CGGGCGCGAT GGGCGTCGTC TACCGCGGCG AGCGCATCGG CCTGGGACGC AACGTCGCCA TCAAGTTCCT GCACGAGCAC ATGGCGACCG ACGACGGCTT CCTCACCCGC TTCGCGGTCG AGGCTCAGGC CACCGGTCGG CTCCAGCACC CCAACTGCGC CGCGGTCATC GACTTCGGCG TGGTCGAGCG CGAGCCCTAT GTCGTCATGG ACCTGGTCGC CGGCCAACCG CTGCGCGACC TGCTCGACGA CGAGCGGCTC TCGGCCGGGC GCGCGCTCGG CATCATGCGC CAGATCCTGG CCGGCCTGGC GCACGCCCAC GAGCAGGGCA TCACTCACCG CGATATCAAG CCCGACAACA TCATGGTCGA GAGCGGGGTC GCGTTTGGCG ACCAGGTGTG CATCCTCGAC TTCGGGCTGG CCAAAGTGCG CGAGTCGGCC ACCGGGCTCA CCGTCGGCAT GGTCGTGGGC ACGCCCAACT ACATGGCGCC CGAGCAGACC CTGGCCCAGC CCGTGGACGA GCGCACCGAC GTCTACGCCG CCGGTATCGT GCTGTTCGAG ATGCTCACCG GCGAGAAGCC CTTCCGCGCC GACACCACCC CCGAGATCCT GCGCATGCAG CGCGAGACCC CGCCGCCGCG CCTGGCCTCC TTTGCCGGCG AGGGCGTGTT TTCGGACGAG CTGGAGTACG TCGTCGCCCG GGCGCTGGCC AAGGCGCCCG CGCAGCGCTT CCACTCCGCC ACCGCCTTCG CCCAGGCGCT CGACGAGGTG CCCGAGATGG CGGCGCGAGC GGCGACGCCG ACCCCGCTGC CGGTCGCGCT CGAGCCCACC GCGCCGCGCC AGACGCCCAT CCCCGGGCAG TCCCATGTCT CGGTATCGGC GCCCACCGCC CTGGTCGACG CCGCCGCCAG CGACGCCTCG CGCCTGCATC CGCGCCAGCC CACCTCGAAT CAGGCCGCCC ACGCGCCCGG CAACCGCGGC GCGATACCGG GCAAGCGCTG GATGCTCATC GGCGGCGGCG GCCTGCTGGC CCTGATCGTC CTCGCGCTGG CCATCACCTC GGCCTCGGAT GCGCCCGCGA CCGACGACGG TACTGCGTCT CTGGTCGATC CGTCCGAAAT CGAAATCGAA GCGCCGAGCG GAACCGAGCA GCTCGAGGAG AAACTCGAGG AAAAGCTCGC CGAGGCGCGC GCGCTCACGG CCACCGAGCG CACCACCGAG GCCCGCGCCC TGCTCGAGAA GCTGCGCGGA GAGCATCGCG AGGTCGCCGA GGTCCACTAC TTGCTCGGAC AGGTGTACTT CGAAACCCTG TGGGTCAAGG ACGGCCTGGC CGCGTTCGAA GACGCCATCG AATTGAACCC GGCGTACAGC CGGGATCCCG CGTTTATCGA CAGCGTGGTC TACGGCCTGG CCAACGACCG CTACCACAAA GCGGTCGCCC ACTTCCTCAC TCGCCGCGTC GGCGCCGCGG CCCGGCCCGC GGTCGCCGAG ATGGCCGAGA ACTATCACCG GCGCGAGGTC CGCACCCGCG CCAGCCGTCT GCTGCGCCGT CTGCCCAAGT GA
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Protein sequence | MSSARVRDIL APVSDDRIGS ELDGRYRIQD KLGAGAMGVV YRGERIGLGR NVAIKFLHEH MATDDGFLTR FAVEAQATGR LQHPNCAAVI DFGVVEREPY VVMDLVAGQP LRDLLDDERL SAGRALGIMR QILAGLAHAH EQGITHRDIK PDNIMVESGV AFGDQVCILD FGLAKVRESA TGLTVGMVVG TPNYMAPEQT LAQPVDERTD VYAAGIVLFE MLTGEKPFRA DTTPEILRMQ RETPPPRLAS FAGEGVFSDE LEYVVARALA KAPAQRFHSA TAFAQALDEV PEMAARAATP TPLPVALEPT APRQTPIPGQ SHVSVSAPTA LVDAAASDAS RLHPRQPTSN QAAHAPGNRG AIPGKRWMLI GGGGLLALIV LALAITSASD APATDDGTAS LVDPSEIEIE APSGTEQLEE KLEEKLAEAR ALTATERTTE ARALLEKLRG EHREVAEVHY LLGQVYFETL WVKDGLAAFE DAIELNPAYS RDPAFIDSVV YGLANDRYHK AVAHFLTRRV GAAARPAVAE MAENYHRREV RTRASRLLRR LPK
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