Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1822 |
Symbol | |
ID | 8544204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2513313 |
End bp | 2514716 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646386528 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_003266263 |
Protein GI | 262195054 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.449676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.314842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTC TACACACCTC GGACTGGCAC CTCGGGCACA GCCTGCACGA CGTGTCGCGC GACTATGAAC ACGAGTGCTT TCTGCGCTGG CTCGTGGACA CCCTCGAAGC CGAAGCCGTG GACGCCCTGC TCATCACCGG CGACATCTTC GACTCGGCCA ACCCGCCGGC CACCGCCCAG GCGAGCTGGT ACCAGTTTCT GGCCGAGGTC CACGCCCGCC TGCCCGGCCT CGACGTGCTC GTCATCGGCG GCAACCACGA CTCCGCCGCC CGCCTCGAGG CGCCCAAACC CGTGCTCTCG GCCCTGCGCA CCCACGTCAT CGGCGCCCTG CGGCGGGGCC CGCGCGACCA GCACGGCCGG CGTCCGCTCG AGCTTGAGCG CGCCATCGTG CCGCTCCGCG ATCGCGACGG CGAGGTCGCC GCCATCGTCG CCGCCGTGCC CTTCCTGCGC ACCGCCGACC TGCCGCGCCC GCGCCGCGCC AGCGCCGACG CCACCGTCGC CAGCGAAGTC ACCGACGCCA GTGACGGCCC AGCCGACAGC GGCGCCAGCG ACGCGGACGC CGGCGACGAG GAGCTGCGCC GCGACCCGCT CATCGGCGGC GTGCGCCAGG TCTACGCCGA GGTCCTCGAC GCCGCCCGCG CGCGCCTGCA GCCCGGCCAG GCGCTGCTGG CCACCGGCCA CTGCTACATG GTCGGCACCG ACATCTCGAC CCTGAGCGAG CGCCGCATCC TGGGCGGCAA CCAGCACGCC CTGCCGGTGA GCATCTTCCC CGACGACGTC GCCTACGCCG CCCTCGGCCA CCTGCACAAA GCCCAGCGCG TCGGCGGCCG CGAGGGCGTG CGCTACGCCG GCTCGCCCAT CCCGCTGGCG CTCGACGAGG CCCGCTACCG CCACCAGGTT TTGCTCGTGG AGCTCGAGGG CCCGGCCCTG GCCGAGGTGC GCAGCCTGAG CGTGCCGCGC ACCGTGGACA TCGTGCGCAT CCCCAAGTCC GGCGCGGCCT CGCCCAAGGA GGTCTTCGCC GCCATCGAGG CGCTGCCCGC GTGGACCCCG GGCGAGGGCG ATCCACAGAA ATCGGACACC CGTCCCTTTC TCGAGCTGAG CGTGGCCATC GACAAGCCGC GCGCGCAGCT CAAGGGCGAG GTCGAGGACA AGCTGCGCGG CAAGTGGCCG CGCCTGGCCA AACTCGGCGT GGTCCGCCGC GGCGACGGCG CGCCTCTGGC CGACGCGCTG CCCACCCGCG AGCTGCGCGA GCTCGACCCC GAAGAGGTGT TCTTGCGCCG CTACGCGCGC GATCACGCGG GCGCGCCCGA CGACGATCTC TTGCAGTCCT TTCACCGCGT CCTCGAAGAC GCCTACGCGC AGCGCGGCGA CCAAGCGCCC GCGCGCGGGG AGCCCGAAGC GTGA
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Protein sequence | MRLLHTSDWH LGHSLHDVSR DYEHECFLRW LVDTLEAEAV DALLITGDIF DSANPPATAQ ASWYQFLAEV HARLPGLDVL VIGGNHDSAA RLEAPKPVLS ALRTHVIGAL RRGPRDQHGR RPLELERAIV PLRDRDGEVA AIVAAVPFLR TADLPRPRRA SADATVASEV TDASDGPADS GASDADAGDE ELRRDPLIGG VRQVYAEVLD AARARLQPGQ ALLATGHCYM VGTDISTLSE RRILGGNQHA LPVSIFPDDV AYAALGHLHK AQRVGGREGV RYAGSPIPLA LDEARYRHQV LLVELEGPAL AEVRSLSVPR TVDIVRIPKS GAASPKEVFA AIEALPAWTP GEGDPQKSDT RPFLELSVAI DKPRAQLKGE VEDKLRGKWP RLAKLGVVRR GDGAPLADAL PTRELRELDP EEVFLRRYAR DHAGAPDDDL LQSFHRVLED AYAQRGDQAP ARGEPEA
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