Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1797 |
Symbol | |
ID | 8544179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2484834 |
End bp | 2486390 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646386503 |
Product | hypothetical protein |
Protein accession | YP_003266238 |
Protein GI | 262195029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000320135 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCTT CCTCCGAGAA ACAATCTGCC CGTCGCGTCC CCGGCTGGGC GTTGGTGCTG GTCTGTATCG CGCTGGTCGC GATCACGGTA TTCGTCGCCG GCCGTACGAT CGGTGCGCGC CCGGCGGGGA CCAGTATCGT CGAGCTGGTC GCCATCGACC GCGAATACGC GGCGCTGGTG CGCAATACCA ACGAGGAAGG CGATCGCTTC TTCCTCAGCC TGCTGCACAC TGAGCGCGGC GAGGCCTGGG GCGCGCTGCT GCCGCGATCG GGTCCCTGGG GCGGCCCGCG CGGCAATCTG GCGGCCACGG CCGACGTGAT CAGCGTGCGC GCGCGCACCG GCGGTGTGCC CTACGCGCAT ATGTTCGCGG CCGCGCGCGG GGCCAAGCTG GGCCGCTATC GCCTCGACGT CGAGGGCGAC GAGGAGATGC TCAAGACCCC GCTGCCGGTC GCCGAGGTGC CGCGCGTGGG CGTGGTCGCG GACGCGGGAC AGTCGTTCGA ATTCCTGCGC CGCGAGGGCG AGGCGGTCAC TGTGGTGGCC ATCGATCTCG AGCACGGGCG ACGTCTGTGG CGCGCCCATG TCGGCGCCGC CGAGGATGAT CTGGGCGAGA TGGCGCCGGT GTGGCTGCGG CGCGACGCGC TGCTGGTGTT CACGGGCGGC AGCCCAGGGA CAGGCGGCCG CCTCGATGTA CTCGCGCGCG ACACCGGGGC GCGCCTGTTC GAGCCGCTCG AAGACATCGA GGGCGTGCCC TGCGTGCTCG GCGAGCGCGT CTACGCGAGC GCGCGCGGCC GCATCTGGAT GACCTCGCTG AGCGATGCCG CGGTGCGCGA CCTGGGGCCC AGCGGCGATG TGCGCGGCAC CGGCGTGTGC GGCCATCGCG GTGAGCGCGA TTTCGTCGTC GTGTCCGATA AAGATGCTCA GGCCGCGCTG CTGGCGTTCA CGCCCGGTGC GTCTGCGCCT GTGCCTGTGC CTGCCAACGG CGACGATGGC GACGATGGCG ACGATGGCGA CAGCGACGAG TTCGCGGTAG AGACCGTGCC CTGGAGCGCG CTGCTGCCGC TCGGCGGCGC CTTGCGCGTC GATGGCGAGC TGCTGGCGGC TGCGCCCGAC GCCGCGATGC TGGGGACGGG CGCCGCTGCG CCGAGCTTCG TGCCGTTGCT GGTGGGCGAG GCCGGGGCAC CGCAGCTCAT CATCGTCGAT CTCGACGAGC TGCGCGTGGT GCGCCGCAGC CAGCCCGCGG CGGCGCTGGC CGGCGCTCGC ATCGTGCTGG CGGACGGGCG TTTCTACCTG TGGACGCCGG CGCCGCTGCT GGCCGCGTTC GGCGACCAGG GCGAGATCGC GGCCGCCGTG GCGCTGGACG GCATGGCGCC GGTGTGGCCC AAGCAGTTCG CCGACGGCCA CGTCTGGGTG TACCGCTCAG ACGACGCCGA GCGGCCGCTG TGGTTGGTGC TCGAGGGCGC CACGCTGCGC GTGCGCGCGG CCGGCCTGGG CACCGAGGTC GATGTCGAGC CGCCGGTCTT GAACGACGCG GCCGCGGCGC TGCCGGCTCT GCGCTGA
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Protein sequence | MSASSEKQSA RRVPGWALVL VCIALVAITV FVAGRTIGAR PAGTSIVELV AIDREYAALV RNTNEEGDRF FLSLLHTERG EAWGALLPRS GPWGGPRGNL AATADVISVR ARTGGVPYAH MFAAARGAKL GRYRLDVEGD EEMLKTPLPV AEVPRVGVVA DAGQSFEFLR REGEAVTVVA IDLEHGRRLW RAHVGAAEDD LGEMAPVWLR RDALLVFTGG SPGTGGRLDV LARDTGARLF EPLEDIEGVP CVLGERVYAS ARGRIWMTSL SDAAVRDLGP SGDVRGTGVC GHRGERDFVV VSDKDAQAAL LAFTPGASAP VPVPANGDDG DDGDDGDSDE FAVETVPWSA LLPLGGALRV DGELLAAAPD AAMLGTGAAA PSFVPLLVGE AGAPQLIIVD LDELRVVRRS QPAAALAGAR IVLADGRFYL WTPAPLLAAF GDQGEIAAAV ALDGMAPVWP KQFADGHVWV YRSDDAERPL WLVLEGATLR VRAAGLGTEV DVEPPVLNDA AAALPALR
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