Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1780 |
Symbol | |
ID | 8544162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2458596 |
End bp | 2460992 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646386487 |
Product | Polyphosphate kinase |
Protein accession | YP_003266222 |
Protein GI | 262195013 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0855] Polyphosphate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0316915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.345655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTAATC CGCCGCAAGA ATCCTCCTCC CCCGTCCACC TGGCCGACGC CGACGAACCC GAGCGCGACG CCGACGAAGC GCGCGCCGAC GCTGATTCCG GCAGCGACGA CGATTCCGGC AGCGACGTCG AGCCCAGCAG CGACGCCGAC GCCGAGAGCG AGAGCGCGCG CGTGGCCAGC GCCGCGCACG ACGACGCGCA GCCCACGCCG GCTCCGGGCA ACGAGGCCCG CACCCCGGCC ACCGCCAACC CCGGGCCGCT GCCCGACATC GACCGCGCCT TGACCGCGCC CGAGCTGTTC CTCAACCGCG AGCTGACGTG GCTGAACTTC AACTGGCGGG TGTTGCACGA AGGCGAGGAC CGGCGCACGC CGCTGCTCGA GCGGGTCAAG TTCCTGGCCA TCGCCGCGTC GAATCTCGAC GAGTTCTTCA TGAAGCGCAT CGGCGGCCTC AAGCAGCAGG AGGGCGCGCG CATGCCCGAG CTCACGGTCG ACGGGCGCTC GCCGCAGCAG CAGATCGCCG AGTGCTACCA GGTCGTGCGC GAGCTCGAGA CCCGCATGCA CGCGCTGATG ATGCGGCTGG TGGCGCAGCT CCGCGAGCAG CACATCACCA TCGCGCGCTA CGACAACCTG GCGCCGGCCG ATAAGAACTT CCTGCGCCAG TACTACCTGG AGAACATCTT CCCGCTGGTC ACGCCCCAGG CCATGGACCC GGCGCACCCC TTCCCCTTCG TCTCCAACCT GTCGCTCAAC CTGATGGTGA CCCTGCACTA TCCCAAGGAT CAGGTGTCGC GCATGGCGCG GATCAAGGTG CCCGTGGGCG GCGGCATCCC GCGCTTTCTC CAGGTCGGCA CGCGCAACCT GTTCGTGCCG CTCGAGGAGG TCATGGGCTC GAACCTCGAC CTGCTGTTCC CCGGCATGGA GATCGAGCGC TACGAGCTGT TCCGGGTCAC GCGCAACGCG GTCACCGAGC TCGACGAGGA GGACGCCGAC GACCTGCTGG AGATGATCGA GGCCGAGCTG CGCGAGCGCA AATTCGCCCC CATCGTGCGC CTGCAGGTGG CCAAGGGCAT GAGCGACCAG CACCGCGGCA TGCTGGCCGC CGAGCTGGGC CTCGACGAGG CCGCCGACGT GTTCGAGATC GAGGGCATGC TGGGCAAGGC CGACCTGTGG GACATCGCCA GGCTCGACAT CCCCGAGCTG CGCGACCCGC CCCATCACCC CGTGCACTCG CCGGACATGG CCAACTCGCG CAGCGTGTTC CACGTCATCC GCGACGCCGG CTCGGTGCTC TTGCACCATC CCTACGAGTC GTTCGCGACC TCGGTGGAGC GTTTTTTGCG CGAGGCCAGC ACCTGCCCAA AAGTCCGCGC GATCAAGATG ACCCTGTACC GCACCTCGGC CGACTCGCGC GTCATCGAGT ACTTGGTCGA CGCCGCGCGC AACGGCAAGC AGGTGGCCGT GGTGCTCGAG CTCAAGGCGC GCTTCGACGA GGCCGCCAAC ATCCGCTGGG CCAGCCGCCT CGAGCGGGTC GGCATCCACG TCACCTACGG CGTGGTCGGC CTCAAGACCC ACTGCAAGGT CATCTTGGTC GTACGCCGGG ACTACAACGG CCTGCGCCGC TACGCGCACA TCGGCACCGG CAACTACCAC GCCGGCACCG CGCGCCTGTA CTCCGACTTC GGCATGATCA CGTGTGACGA CGTCATCGGC CACGACCTCA CCGAGCTGTT CAACTATCTG ACCACCGGCT ACAAGCCGCG GCGCAACTAC CTCAAGCTGT TGCCCGCGCC CAAGCTGCTC AAGCAGGCGC TGATCGACAA GATCGCACGC GAGGCGCGGC AGCACAGCGA GGACGCGCCC GGCCACATTC AGATGAAGAT GAACGCGCTC GAGGATGTCG ATATCGCCCG CGCCCTGTAC CAGGCCGGAC AGGTGGGCGT GAAGATCGAC CTTCTGGTCC GCGACACCTG CCGCCTGCGT CCGGGCATTC CCGACCTGTC CGAGTCGATC AACGTCATCA GCGTGGTCGG CCGCTTCCTC GAGCACGCGC GCGTCATCTA CTTCAAGAAC GGCGGCAACG AGGAGTATTA CATCGGCTCG GCCGACTGCA TGAAGCGCAA CCTCGAGAGT CGCGTGGAAG TCGTCGTGCC GGTCGAAAAA CCCGAGCTGC GGCGCGAGCT GCGCATGTTC CTCGACACCC AGCTCGCCGA CCAGCGCTCG GCCTGGGTGA TGCAGCCGGA CGGCAGCTAC GTGCAGCGGC GGCCGGCCAA GCCCGGGCGC AAGAACGCCA AGAGCAGCCA GCTCGCGTTC ATCGAGTACG CCGAGCGCCG CCACCGCGAG GCCACGCGTC TGCGCCGGCG GCAGTCGCGG AGCGTCGCCC GGCGCCGCAT TCGCTAG
|
Protein sequence | MSNPPQESSS PVHLADADEP ERDADEARAD ADSGSDDDSG SDVEPSSDAD AESESARVAS AAHDDAQPTP APGNEARTPA TANPGPLPDI DRALTAPELF LNRELTWLNF NWRVLHEGED RRTPLLERVK FLAIAASNLD EFFMKRIGGL KQQEGARMPE LTVDGRSPQQ QIAECYQVVR ELETRMHALM MRLVAQLREQ HITIARYDNL APADKNFLRQ YYLENIFPLV TPQAMDPAHP FPFVSNLSLN LMVTLHYPKD QVSRMARIKV PVGGGIPRFL QVGTRNLFVP LEEVMGSNLD LLFPGMEIER YELFRVTRNA VTELDEEDAD DLLEMIEAEL RERKFAPIVR LQVAKGMSDQ HRGMLAAELG LDEAADVFEI EGMLGKADLW DIARLDIPEL RDPPHHPVHS PDMANSRSVF HVIRDAGSVL LHHPYESFAT SVERFLREAS TCPKVRAIKM TLYRTSADSR VIEYLVDAAR NGKQVAVVLE LKARFDEAAN IRWASRLERV GIHVTYGVVG LKTHCKVILV VRRDYNGLRR YAHIGTGNYH AGTARLYSDF GMITCDDVIG HDLTELFNYL TTGYKPRRNY LKLLPAPKLL KQALIDKIAR EARQHSEDAP GHIQMKMNAL EDVDIARALY QAGQVGVKID LLVRDTCRLR PGIPDLSESI NVISVVGRFL EHARVIYFKN GGNEEYYIGS ADCMKRNLES RVEVVVPVEK PELRRELRMF LDTQLADQRS AWVMQPDGSY VQRRPAKPGR KNAKSSQLAF IEYAERRHRE ATRLRRRQSR SVARRRIR
|
| |