Gene Hoch_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1754 
Symbol 
ID8544136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2420803 
End bp2422215 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content73% 
IMG OID646386461 
Productserine/threonine protein kinase 
Protein accessionYP_003266196 
Protein GI262194987 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00149548 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGACGACT TCGGCGCTGG CGAGGACGAC TTCGACCTGT ACGGAGCGAC CCTGGGCGCG 
GGCGCCTACG TCGACGGCTA CCTCATCGAG CACCTGGTCG ACAGCGGCGG CTACGGCGCC
GTGTACCGCG CGCGCCACGC CAGCACCGGC GAGCCCGCCG CGATCAAGCT GCTGCATTCG
CACCTGGCGC GCATCCCCAG CCTGCGCGCG CGCTTCCAGC AAGAAGTGCT CACCCTGCGC
GCGGTCCAGC ACCCGAGCAT CGTGCGCCTG CTGTCGAGCG CGACCCTCGA CGATGGCCGG
CCCTGCTACG TCATGGAATG GCTCGACGGC CACACCTTGA CCGAGGAGCT GGCCAGCCGC
GGCCGCCTGT CGCTCGAGGA CGCCCTGCTC ACCGCTGAGA ACATCGCCAT CGCGCTCACG
GCCGCGCACG CGCGCGGCGT CATCCACCGC GACGTCAAAG CCCGCAACGT CATCGTACTC
GACGCGCCGT CGCGGACGCT CAAGCTCATC GATTTCGGCG TCGCCAAAGT TTCGGACGCG
GTGACGAAAA CCCCTGTGGC GACCACGTCC ACGCTGCTCG GCAGCCCGGC CTCGATGGCG
CCCGAGCAGC TCCGCCACGA GCCCGTGGAC GCGCGCACCG ATGTCTACGG CCTGGGCGTG
TTGCTGTTTC ACCTGCTCAC CGGCCGCCTG CCCTTCGAAG CCGGCGACGC CGCCACCGTC
GAGGATCAGC ACCTGCACGC GCCGCCGCCC GCGCTCAGCG CGCTGGTGCC GGTGCCGCCC
GCGCTCGACC AGGTCATCGC GCGCGCCCTG GCCAAGGACA AGGCCGCGCG CCACGGCAGC
GTGGCCGCGC TGATCGCCGA CGCCCGGGAA GCGGTCGCCG AGCAGCGCGC GCCCGCGCCG
GCCACCGCGC TCTATCTACA GCTCGCCGCC CCCGCCGCCG AGGAAATCGG ACAGTCGGAC
AATGTTGAGC GACCCGGTGC CGAGCATGAC CAAGCTCACA ACGATGACGA CGACGACGCG
CTCGACGAGA TCTTCGACGA CGCGCTCGAC GCCCTCGCCG CCGCCGGTCT CTGCGTCGCC
TGGGAGAGCG CCGACAGCGC GCTGTGTTTC GGCCGCGGCG CCGAGCCCGC GCAGGTAGCC
GCGGTGCTCG CCAGCGCCAG CCAGCTCAGC CATCCCGCGC TGGCCATCGC CGTGCACGTC
GGCGACGCCG CTTTCGGCGA CGGCCGCGAC GCCACCGGCC CGCTCGTGCA CCTGGGCGAC
TGGCTGCCGC CGCTGCATCC CGGGCGGGTC GCGGTCACGC CCGCCGCCCG CGCCGCCGCC
GCTGAGGCCG CTGGCGAGGC CGCTGGCGAG GCCGCCGGCG AGGCCGCCGG CGAGGCCGGG
TGCGACGACG ACCCGCGCCT GCTCAGCGAT TGA
 
Protein sequence
MDDFGAGEDD FDLYGATLGA GAYVDGYLIE HLVDSGGYGA VYRARHASTG EPAAIKLLHS 
HLARIPSLRA RFQQEVLTLR AVQHPSIVRL LSSATLDDGR PCYVMEWLDG HTLTEELASR
GRLSLEDALL TAENIAIALT AAHARGVIHR DVKARNVIVL DAPSRTLKLI DFGVAKVSDA
VTKTPVATTS TLLGSPASMA PEQLRHEPVD ARTDVYGLGV LLFHLLTGRL PFEAGDAATV
EDQHLHAPPP ALSALVPVPP ALDQVIARAL AKDKAARHGS VAALIADARE AVAEQRAPAP
ATALYLQLAA PAAEEIGQSD NVERPGAEHD QAHNDDDDDA LDEIFDDALD ALAAAGLCVA
WESADSALCF GRGAEPAQVA AVLASASQLS HPALAIAVHV GDAAFGDGRD ATGPLVHLGD
WLPPLHPGRV AVTPAARAAA AEAAGEAAGE AAGEAAGEAG CDDDPRLLSD