Gene Hoch_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1739 
Symbol 
ID8544121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2368317 
End bp2369600 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content72% 
IMG OID646386446 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003266181 
Protein GI262194972 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.452166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGG ACGACACCAC CCGCATCGCT CAGCCGCTCA CGCTGCCCTC GGGCCTCCAG 
TTGCCCAACC GCGTCGCCAA GGCGGCGATG AGCGAGAACA TGGCCGACCC CGATGGCGGC
CCCTCCGAGG CCCTGATCCG GCTCTACGAG CGCTTCGGGA GCAGCGGCGC TGGTCTGCTG
ATCACGGGCA ACGCCATGCT CGATCCCGGC GGCCGCGCCG AGCGCGACAA CGTGGTGATG
CTCGGCGACC ACGGCGAGCG GCTGGCGGCG TGGGCGCGCG CGGCCAAGGC CGGGGGCTCG
GCGGTGATCA TGCAACTGTG TCACGCCGGC CGGCAGACCT CGCGCACGGT GTCGTGGAAG
CCGGTGGCGC CGTCGGCGGT GAAGCTGTCG CGCGGCGGCA TGTTCTCGAC CCCGCAGCCG
CTCAGCGAGG AGCAGATCGC CGTGCTCGTG CAGCGCTTTG GCCAGGCCGC GGCCATGGCC
CAGGCCGCCG GCTTCGACGG CGTGCAGATC CACGGCGCCC ACGGCTATCT CGTCAGTCAG
TTCCTGTCGC CGCTCACCAA CCTGCGCAGC GACCGCTACG GCGGCGACAT CGACGGCCGC
ATGCGCTTTC TGCTCGAGAG CGTGCGCGCG ACCCGGGCGG CCACCGGGCG CGCGTTCACC
ATCGCGGTCA AGCTCAACTC GGCCGACTTC CAGCGCGGCG GGTTTACCAA CCAGGAGTCG
ATGTACGTGG CCCAGGCGCT CGAGGCCGAG GGCATCGATC TGCTCGAGAT CTCGGGCGGC
AGCTACGAGA AGCCGGCGAT GATGCGCGAC GAGTCGCAGG TGCGCGAGAG CACGCGGGCG
CGCGAGGCCT TTTTCCTCGA GTACGCCGAG CGCATGCGCG AGGTGGTGTC GCTGCCGCTG
ATGGTCACCG GCGGCTTCCG CTCCCGCGCG GCCATGAACG CGGCCCTGGC CAGCGGCGCC
ACCGACCTCA TCGGGATGGC GCGGCCGCTG GCGGTGGCGC CGGAGCTGGC CGGCCAGCTC
GTGCGCGGCG AGATCGATGA GGCGCCGTCG GCCAATCTCG ACGTCGGCGT GCGCCTGTTC
GACGATCTGC TGCAGATCCA CTGGTACCAG CGCCAGCTCC GGCGCATGGG CGCCGGCCGC
GATCCCAACG CGCGCTTGGG GCGCGCGAGC ACGCTGGCGA TGTGCATGAG CCAGATGTCG
GCCGAGCTGA CGAGCGCGTG GCTGCGGCGC GAGGGCCACG CGCTCGACGC CGGCCCGATT
GTGGGCGATG GTGTCCAGGC ATGA
 
Protein sequence
MNTDDTTRIA QPLTLPSGLQ LPNRVAKAAM SENMADPDGG PSEALIRLYE RFGSSGAGLL 
ITGNAMLDPG GRAERDNVVM LGDHGERLAA WARAAKAGGS AVIMQLCHAG RQTSRTVSWK
PVAPSAVKLS RGGMFSTPQP LSEEQIAVLV QRFGQAAAMA QAAGFDGVQI HGAHGYLVSQ
FLSPLTNLRS DRYGGDIDGR MRFLLESVRA TRAATGRAFT IAVKLNSADF QRGGFTNQES
MYVAQALEAE GIDLLEISGG SYEKPAMMRD ESQVRESTRA REAFFLEYAE RMREVVSLPL
MVTGGFRSRA AMNAALASGA TDLIGMARPL AVAPELAGQL VRGEIDEAPS ANLDVGVRLF
DDLLQIHWYQ RQLRRMGAGR DPNARLGRAS TLAMCMSQMS AELTSAWLRR EGHALDAGPI
VGDGVQA