Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1734 |
Symbol | |
ID | 8544116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2361890 |
End bp | 2363737 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646386441 |
Product | hypothetical protein |
Protein accession | YP_003266176 |
Protein GI | 262194967 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00167071 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAT GGAGATGGTT GTGTATGTTC GCGCTCGCGA TGCCGCTGTG GGCGTCGGGT TGCGCCTGGC TGGTTCTCGA GGAGCCGGCG TGCACTTCGG GCGAGACCTG TCCGGGCGAC TTCGTGTGCG ACCCGGCCAC CGGCCTGTGC CTCACCCCGT GTCCGCCCGG CAGCGAGCTG TGCGACGGCA TGTGCGTCAA TCCGCAGCAG AACAACAGCC ACTGCGGCGC CTGCGGCGAG GTCTGCGGCG ACGGCGAAGT GTGCGCAGCC GGCGAGTGCG CGGCCACCTG TGGGCCCGGC ATCAGCACCT GCGAGGGCGA GTGCGTGGAC ACCGACATCG ATCCCGCGCA CTGCGGCGCC TGCGGCAACG CCTGCGCGGC CGACGGCTAC TGCGTGGGCG GCGCGTGCGC GGCCACCTGC GCGCCCGGCA CCGAGCCCTG CGGCGGCATC TGCAGGGACA CCGCCAGCGA CCCGGACCAC TGCGGCGGCT GCGGCCTGAG CTGCGGCGAG GGCGAGCTGT GCGAGGCTGG CGCGTGCACC TGCCCGAGCG GACTCGACGA GTGCGCGGGC ACCTGCATCG ACTTCGACAG CGAGCCCGCG CACTGCGGCG CCTGCGGCAA CGCGTGCTTG GACGGCCAGA ACTGCGTCGA TGGCGCGTGC GCGTGCCCGG CCGGGACCAC CCTGTGCGGC GGCGCGTGCG TCAACCTCGA CACCGACGCC GAGCACTGCG GCGTGTGCGA AAACCAGTGC AGCAGCGGCA GCGCGTGCAG CGGCGGCGCG TGCGTGTGCG TTCCCGGACA GACGTACTGC GACGGCGCGT GCACCGACCT CGGCGACGAT GACGCGCACT GCGGCGCTTG CGGCAACGCC TGCGGCGGCG GCATGAGCTG CGAGGGCGGC GCGTGCGAGT GCCCGGCCGG CTTCACCGAG TGCGGCGGCG CGTGCAAAGA CCTCGAGCGC GACGTGCTCT CGTGCGGCTC GTGCGGTCAC GCTTGCGACT CGGGCAAGGC GTGTGTCGAT GGTCAGTGCG TGTCGCCGTT TACCGGTACT CGGACAGCGC TGCCACTGCC CAACGGTTGC TCGGCCTTTC CGCTATCGCC CGACGAGTGC GGCACGCCGA TCGCCACGGA GACAGTGCCG TTCGAATTCG ACGACCTTGA TGAGACAATT ATATATAATC CCGATGAGCC ATTTGCTAGC AACGAATCTC TCGTTTTATC GGGCGATGCG CGGTCGTTTG ATCATGGTGG TGCCCTAGGG TACGTTGGGT TTTTCGATGA GGGGGAGCAT TCACTCACGC AAAGGAGCAT TCTCGCAGGG TCTAGCTGGG GAGCTTTCTC TCTCGGTATC CGCTCCGGTA TTCGATCCTG TGCGCGCCCT TCGAGTCTCC GGTTCTGGGT TAGATTCCCT GTTCTAGATA TTGTCGCTAC TCTCGTTCGT ACTACCCTTA CAGGCAAATA TAACACCGGT GGAATAGGGT TTTTCGAGGC CACATCTTTA CAGATAAATC CAGAAACTGG TGAAACCTGT GACCAAGTGT GCGGCTATAT CTCAATGCGA TGCGATGACA CGCAGCAGTG GTACAGGGCG ACGATTCCCC CTCGTAAGAC CCTCGCTCTG GAGATCGCCT TACGCAGTAG TGGTAGTACC TACTTCAATG TCGCCGTATT TCGAACAGAC GAATCACAGA TTTTCCATGC GGCTAGTGGG AGCGTGGGCG GCTCCTACGG ATTCTACACT GCGAGGCTCA GGAACAACCT CGACATTCCC CAGGACGTCG TATTGAGCGT CATCCCATGG AACGGAGATG GTGTGCACTA TCAAATCGCG GCAGCGATAG AGCAGTAA
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Protein sequence | MIKWRWLCMF ALAMPLWASG CAWLVLEEPA CTSGETCPGD FVCDPATGLC LTPCPPGSEL CDGMCVNPQQ NNSHCGACGE VCGDGEVCAA GECAATCGPG ISTCEGECVD TDIDPAHCGA CGNACAADGY CVGGACAATC APGTEPCGGI CRDTASDPDH CGGCGLSCGE GELCEAGACT CPSGLDECAG TCIDFDSEPA HCGACGNACL DGQNCVDGAC ACPAGTTLCG GACVNLDTDA EHCGVCENQC SSGSACSGGA CVCVPGQTYC DGACTDLGDD DAHCGACGNA CGGGMSCEGG ACECPAGFTE CGGACKDLER DVLSCGSCGH ACDSGKACVD GQCVSPFTGT RTALPLPNGC SAFPLSPDEC GTPIATETVP FEFDDLDETI IYNPDEPFAS NESLVLSGDA RSFDHGGALG YVGFFDEGEH SLTQRSILAG SSWGAFSLGI RSGIRSCARP SSLRFWVRFP VLDIVATLVR TTLTGKYNTG GIGFFEATSL QINPETGETC DQVCGYISMR CDDTQQWYRA TIPPRKTLAL EIALRSSGST YFNVAVFRTD ESQIFHAASG SVGGSYGFYT ARLRNNLDIP QDVVLSVIPW NGDGVHYQIA AAIEQ
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