Gene Hoch_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1614 
Symbol 
ID8543996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2205688 
End bp2206251 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content68% 
IMG OID646386322 
Productisochorismatase hydrolase 
Protein accessionYP_003266057 
Protein GI262194848 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA CCCACCCCGA AGGCAAAGCC CCCTCGGCGC TCGTCGTCAT CGACATGCTC 
ACGCCCTACG ACTACCGCGA CGCCGAGATC GTCGCCGAGC ACGCGCCCGA GCCGGTCGCC
AACATCGCGC GTCTGCTGGA GCGCTGCCGC GCCGAGGGCG TGCGCATCAT CTACGTCAAC
GACAACTACC GCGACTGGGA CTGTTCGCCC GCGGAGCTTG TGAGCGATGC GCTCGCCGGA
CAGCACCCCG AGCTCGTCGA GCCGCTGCTG CCGCAGCCGG GCGAGGCGTT CATCTTGAAG
GTCCGGCACT CGGCCTTTTA CAGCACACCG CTCGAGTATT TGCTGGCCAC CGAGGGCATC
GGCCGGGTCG TGCTCACCGG CCAGGTCACC GAGCAGTGCA TCCTGTACAG CGCGCTCGAC
GCCTACGTGC GCAACTTCCG CCTCGCCGTG GTCGAGGACG CCGTCGTGCC CCTCGATCGG
GAGCTGGCCC GCGCCTCGCT GCGCATGATG GAGCGCAACA TGCGCGCCGA TATCGAACGC
ACCGCGAACG CCGACCTGCG CTAA
 
Protein sequence
MIETHPEGKA PSALVVIDML TPYDYRDAEI VAEHAPEPVA NIARLLERCR AEGVRIIYVN 
DNYRDWDCSP AELVSDALAG QHPELVEPLL PQPGEAFILK VRHSAFYSTP LEYLLATEGI
GRVVLTGQVT EQCILYSALD AYVRNFRLAV VEDAVVPLDR ELARASLRMM ERNMRADIER
TANADLR