Gene Hoch_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1519 
Symbol 
ID8543901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2070728 
End bp2071048 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content69% 
IMG OID646386229 
Productprotein of unknown function DUF74 
Protein accessionYP_003265964 
Protein GI262194755 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.365478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTCG CCACCACCGA CGAGCTGCCC GGCTACCGCA TCGTGCGGGT GCTGGGCCTG 
GTGCGCGGCA ACACGGTGCG CGCGCGCAAC GTCGGCCGCG ATTTTCTCGC CGGCTTCAAG
AGCATCATCG GTGGCGAGGT GCGCACGTAC ACGCAGATGC TGGCGCAGTC GCGCGAGCAG
TCGCTCGACC GTCTCAAGGC GCACGCGCTC GAGCTGGGCG GAAACGCCGT GGTCGGCATG
CGCATCGCGA CCTCGATGGT GATGCAGGGC GCGGCCGAGA TCCTGGCCTA CGGCACCGCC
GTCATCGTCG AGCCCGAATA G
 
Protein sequence
MLVATTDELP GYRIVRVLGL VRGNTVRARN VGRDFLAGFK SIIGGEVRTY TQMLAQSREQ 
SLDRLKAHAL ELGGNAVVGM RIATSMVMQG AAEILAYGTA VIVEPE