| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1479 |
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| Symbol | |
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| ID | 8543861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2005668 |
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| End bp | 2007479 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646386190 |
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| Product | PTS system, glucose-like IIB subunint |
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| Protein accession | YP_003265925 |
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| Protein GI | 262194716 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAT TCCTGCAACG TATCGGGCGC TCGCTGATGC TGCCCATCGC CGTGATGCCG
GCCGCCGCCT TGCTGATGCG GCTGGGCGCG CCGGACGTCC TCGACCTGCC CTTCATCCAG
GCGGCGGGCA GCGAGATCTT CGTCTACCTG CCGCTGCTGT TCGCCGCCGG CATCGTCATC
GGCATGACGG CCGACAAACG CGGCGAGGCC GTGCTGGCCG CCGTGGTCGG CTATTTCGTG
CTGATCAAGG CCATGGGCGT GCTGCTCGTC GACGTGGGCG AGTACGCGGC CGACGCCGCG
ATCGTGAGCC GGTTGCCGGG CAACCCGCTG ATCGGAATCA TCGCCGGGCT GGTCACGGCC
GCGCTGTACT CGCGCTTTAG CAACCTGCGT CTGCCCGAGG CGTTGGGGTT CTTCTCGGGG
CGGCGGCTGG TGCCCATCCT GACCTCGGTG GCCATGCTGG TCGTGGCGCT GGCTCTGGTC
CTGGTCTGGC CGCTGGTGTG GGACGGGCTG GCGAGCTTCA ACGAGTTCCT GGCCGGCCTC
GGCGCCCTGG GCGCGGCCGT GTTCGGTTTC CTCAACCGCT TGCTGCTGCT GCTGGGGCTG
CACCACGTGA TGAACAGCTT CTTCTGGTTC AACATCGGCG AGTTCGTCAC GCCCGAAGGC
ACCATGGTGG TCGGCGATAT CCCGCGCTTT TTGGCCGGGG ATCCGAGCGC GGGCGTGTAT
CAGGTGGGCT TCTACCCGGT GATGATGGGC GGTCTGGTCG GCGCCGCCCT GGCCATGATC
CGGGCCGCGC GTCCGGAAAA CCGCCGCAAG GTCGCCGGTA TTCTGGGATC GGCGGCCCTG
GTCTCGTTCG CCACCGGCAT CACCGAGCCG CTCGAGTTCT CGTTCGTGTT CGTGGCCCCG
CTGCTCTACG GCGTGCACGC GTTGCTGACC GGCGTGTCCA TGTACCTCAC GGTGTCGCTG
GGCATGACCC ACGGCTTCGG CTTCAGCGCC GGCCTCATCG ACTACGTCTT GAACTTCGGC
CTGGCCCAGC ATCCGCTGGG GCTGGCGGTC GTGACCGTGG CTTTCTTCGT GCTCTATTTC
GCCGTGTTCA GCGTTCTCAT CCGGGTGCTG AATCTGCGCA CGCTCGGCCG CGGCGACGCG
ATGGAGGACA GCGAGGCCCA GGCCGCGAGC AGCGCGCAGC CGCTGCCGGT CGCGGTCGCG
GGCCGGGTCG GAGACGAGTT TTCCGAGCGC GCGGCCGGCA TGCTGGCCGC GCTGGGCGGA
CGCGAAAACG TCGACAGCGT CGATAGCTGC GCCACCCGGC TGCGGCTCGG GGTCCGGGAC
TCTTCGCTGG CCGACGAGGG CGCGCTGATG CGCTACGGGG CCAAGGGCGT GATCCGGCCG
TCGGAGCGCG CGGTGCAGAT CATCATCGGC AGCGACGTGC AGTTCTTTGC CGACGCGCTC
GCCCATCTGC TCGCTCAGCC GGCCGACGCG GACCAGCGGG TCGGCGATGC GCAGAGCTCG
GCGAAGGCCG CGTCCGAGCC GGAGCGCGCG GCGGCGACTA CCGGGACTGC CGGGACTGCC
GCGGCCATCG AGCTCGACGC GCTGCTCGAC GCTCTGGGCG GTGCCGACAA CCTGGACGAA
ATCGCCGCGA GCGCGCACAC GCGTCTGCGC GTCGAGGTCA AGCGCGGCGC CGCCGTGGAC
GAGTCTGCCC TGCGCGCCTG CGGCGTGCGC GGCGTGTTGC TGCGCGGCGA GTGCGTCGAG
CTGCTGGTCG GCGCGGGCGC GGAGCAGCAC CGGGCATCGC TACAAGCGCT ACGCGAGTCC
GCGCGCGCGT AG
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| Protein sequence | MLEFLQRIGR SLMLPIAVMP AAALLMRLGA PDVLDLPFIQ AAGSEIFVYL PLLFAAGIVI
GMTADKRGEA VLAAVVGYFV LIKAMGVLLV DVGEYAADAA IVSRLPGNPL IGIIAGLVTA
ALYSRFSNLR LPEALGFFSG RRLVPILTSV AMLVVALALV LVWPLVWDGL ASFNEFLAGL
GALGAAVFGF LNRLLLLLGL HHVMNSFFWF NIGEFVTPEG TMVVGDIPRF LAGDPSAGVY
QVGFYPVMMG GLVGAALAMI RAARPENRRK VAGILGSAAL VSFATGITEP LEFSFVFVAP
LLYGVHALLT GVSMYLTVSL GMTHGFGFSA GLIDYVLNFG LAQHPLGLAV VTVAFFVLYF
AVFSVLIRVL NLRTLGRGDA MEDSEAQAAS SAQPLPVAVA GRVGDEFSER AAGMLAALGG
RENVDSVDSC ATRLRLGVRD SSLADEGALM RYGAKGVIRP SERAVQIIIG SDVQFFADAL
AHLLAQPADA DQRVGDAQSS AKAASEPERA AATTGTAGTA AAIELDALLD ALGGADNLDE
IAASAHTRLR VEVKRGAAVD ESALRACGVR GVLLRGECVE LLVGAGAEQH RASLQALRES
ARA
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