Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1372 |
Symbol | |
ID | 8543754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 1836621 |
End bp | 1837448 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646386084 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003265819 |
Protein GI | 262194610 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTGA CAGACGAGCG CATCGCCCAG TTCGAGCGCG ATGGATTTAC AATTATCGAG GGCTTGCTCG ACCAGCAGCG CGTCGGCCAG CTCCACGCGG CCATGGATCG CGTGTACGCT GGCGAGTATC GCGCCGACCG CCGTCCGCCG CGTCTGCGCA AGCGGGTGAC CCCGTTTGGC GCCGAGGACA GCGTGCACTG GATCCTCAAC GCCCGCGTCC TCGACGACGA GCTGTGGAAG CTCGCCACCG ACCCGCAGCT CGGCGAGATC GCGGCCCGGC TGCTGCGCAG CGAGTCGGTG TCCATCGTCG AGGATCAACT CCTGGACAAG CCCCCGGGCG GTCGGCCCGT GAACTATCAC CAGGACTACT CCTACTGGCC GTTCTCGCGC GCCACCCAGA TGTGCACCGC GTGGCTGGCG CTGGTGGACA TGAGCATCGA GCACGGCCCG CTGCAGCTCG CGCGCGGCTC GCACACCTGG GGCCACTCGT CCCGGCCCAA AGAGCTGATC CGCGGCAGCG AAGACGAGCT GCTGAGCGCG GCCGCGGCGG CGCGTCCCGA CGACGCCGAG CTCGACTCGG TCACCGCCGT GGTCCCGGCC GGCAGCGCGG TCTTCTTCCA CTGCCTCACC TTCCACGGCA GCGACCGCAA CCAGGCCACC GGCCCGCGGC GCGCCATCTC GCTGCACTGG GCGGGCGCCG AATGCCGCAT GAACCTCGCG GAGACGGCCA GCCACGACTA CCCGTATTTC TTCGCCCGGC TCGCCGACGA GGGGCCCATC GTCAACAAGT ACATGCCCAC CGTCTTTCCC GGGCAGGACG CCCCCTAG
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Protein sequence | MQVTDERIAQ FERDGFTIIE GLLDQQRVGQ LHAAMDRVYA GEYRADRRPP RLRKRVTPFG AEDSVHWILN ARVLDDELWK LATDPQLGEI AARLLRSESV SIVEDQLLDK PPGGRPVNYH QDYSYWPFSR ATQMCTAWLA LVDMSIEHGP LQLARGSHTW GHSSRPKELI RGSEDELLSA AAAARPDDAE LDSVTAVVPA GSAVFFHCLT FHGSDRNQAT GPRRAISLHW AGAECRMNLA ETASHDYPYF FARLADEGPI VNKYMPTVFP GQDAP
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