Gene Hoch_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1349 
Symbol 
ID8543731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1791560 
End bp1792459 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID646386063 
ProductProtein of unknown function DUF2236 
Protein accessionYP_003265798 
Protein GI262194589 
COG category[S] Function unknown 
COG ID[COG3662] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.237793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0637493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAA CCTATCTACA GGAGAGCGCG GTAAGCGAAC ACGGCAATGG CAATGCCCCC 
GACGTGTCGA AGGGACGGCG CGTCAACTTT CGCGAGCCGC AGGGCGAGCC GGGCTTTTTC
GGCCCTGGCT CGATAGCCTG GAGGGTCCAC GCCAACCCGA TCTCCATGGC GATCGGGGGC
GTGGCGGCGG TGCTCTTGGA GTTGGCGGAG CCCCGGGTTC GCTCGGGCGT GTGGAATCAT
TCGATTTTTC AGACCGACCC ACTCAAGCGC ATCCTGCGCA CGCGCGAAGC CACCATGATC
ACGACCTACG CGTCCAGGCC GGCGGCCCAG GCGCGGGTGG ACATGGTGAC GCGGATGCAC
GCGCGCGTCT CGGGCGTGAC CCCGGAAGGG CAGTCCTACA CGGCGCTGGA CCCAGAGCTG
TTGACGTGGG TGCACATCAC GGCGTTCTGG GGATTTCTCA ACGCCTACAA ACGCTACGTC
GCCCCGGATA TGAGTTTGGC GGACCAGGAC CGCTACTACA TGGAGAGCAA GCCGCTGGCG
CGCGCGTTCG GCGCCGTCGA TCCGCCGGGT TTGGTGTCCG AGGTCGATAC CTGGTTCGAG
CGAATGCGCC CCAAGCTGGT CCCGCACCCC ATCATCGACG AGTTCCTGGA CATTGTCTCG
GCGACCTCGC CGATGGGGCT CGTGGGGCGC GTGCTGCAGC CGATGCTGGT GCGGGCGGCC
ATCGATTTGC TCCCGAAAGA CCTGGCCGCG AAGCTGCAGT TGCCCGAGCA ACGGGTACGC
CTCGCGGCGG CCCGCCCGGT GCTGCGTGCG CTGGCGCTGA CGGCGCGCCG GAAGCCGGGC
GAGATTCCCC TGCAGGCCTG CGAGCGGGTC GGCTGCGACT GGCGCGAGGC GCTTACCTGA
 
Protein sequence
MFRTYLQESA VSEHGNGNAP DVSKGRRVNF REPQGEPGFF GPGSIAWRVH ANPISMAIGG 
VAAVLLELAE PRVRSGVWNH SIFQTDPLKR ILRTREATMI TTYASRPAAQ ARVDMVTRMH
ARVSGVTPEG QSYTALDPEL LTWVHITAFW GFLNAYKRYV APDMSLADQD RYYMESKPLA
RAFGAVDPPG LVSEVDTWFE RMRPKLVPHP IIDEFLDIVS ATSPMGLVGR VLQPMLVRAA
IDLLPKDLAA KLQLPEQRVR LAAARPVLRA LALTARRKPG EIPLQACERV GCDWREALT