Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1349 |
Symbol | |
ID | 8543731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 1791560 |
End bp | 1792459 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646386063 |
Product | Protein of unknown function DUF2236 |
Protein accession | YP_003265798 |
Protein GI | 262194589 |
COG category | [S] Function unknown |
COG ID | [COG3662] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.237793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0637493 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTCGAA CCTATCTACA GGAGAGCGCG GTAAGCGAAC ACGGCAATGG CAATGCCCCC GACGTGTCGA AGGGACGGCG CGTCAACTTT CGCGAGCCGC AGGGCGAGCC GGGCTTTTTC GGCCCTGGCT CGATAGCCTG GAGGGTCCAC GCCAACCCGA TCTCCATGGC GATCGGGGGC GTGGCGGCGG TGCTCTTGGA GTTGGCGGAG CCCCGGGTTC GCTCGGGCGT GTGGAATCAT TCGATTTTTC AGACCGACCC ACTCAAGCGC ATCCTGCGCA CGCGCGAAGC CACCATGATC ACGACCTACG CGTCCAGGCC GGCGGCCCAG GCGCGGGTGG ACATGGTGAC GCGGATGCAC GCGCGCGTCT CGGGCGTGAC CCCGGAAGGG CAGTCCTACA CGGCGCTGGA CCCAGAGCTG TTGACGTGGG TGCACATCAC GGCGTTCTGG GGATTTCTCA ACGCCTACAA ACGCTACGTC GCCCCGGATA TGAGTTTGGC GGACCAGGAC CGCTACTACA TGGAGAGCAA GCCGCTGGCG CGCGCGTTCG GCGCCGTCGA TCCGCCGGGT TTGGTGTCCG AGGTCGATAC CTGGTTCGAG CGAATGCGCC CCAAGCTGGT CCCGCACCCC ATCATCGACG AGTTCCTGGA CATTGTCTCG GCGACCTCGC CGATGGGGCT CGTGGGGCGC GTGCTGCAGC CGATGCTGGT GCGGGCGGCC ATCGATTTGC TCCCGAAAGA CCTGGCCGCG AAGCTGCAGT TGCCCGAGCA ACGGGTACGC CTCGCGGCGG CCCGCCCGGT GCTGCGTGCG CTGGCGCTGA CGGCGCGCCG GAAGCCGGGC GAGATTCCCC TGCAGGCCTG CGAGCGGGTC GGCTGCGACT GGCGCGAGGC GCTTACCTGA
|
Protein sequence | MFRTYLQESA VSEHGNGNAP DVSKGRRVNF REPQGEPGFF GPGSIAWRVH ANPISMAIGG VAAVLLELAE PRVRSGVWNH SIFQTDPLKR ILRTREATMI TTYASRPAAQ ARVDMVTRMH ARVSGVTPEG QSYTALDPEL LTWVHITAFW GFLNAYKRYV APDMSLADQD RYYMESKPLA RAFGAVDPPG LVSEVDTWFE RMRPKLVPHP IIDEFLDIVS ATSPMGLVGR VLQPMLVRAA IDLLPKDLAA KLQLPEQRVR LAAARPVLRA LALTARRKPG EIPLQACERV GCDWREALT
|
| |