| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1344 |
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| Symbol | |
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| ID | 8543726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 1784566 |
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| End bp | 1785456 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386058 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003265793 |
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| Protein GI | 262194584 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00247694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0669225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAC TCACCGCCAT GTACGCCTTC GCCCGCGTGG TCGACGCCGG CAGCTTCAGC
GCCGCGGCCC GGCGCTGGGG CCGTTCCAAG GCCGCGGTGT CCAAATACGT CGCCGACCTC
GAAGCCCACC TCGGGGTCAC GCTGCTGCGG CGAAACACCC GCTCGCTCAC GCTCACCGAA
GCCGGCGCGG CGTATTACCC GCGCTGCATC GAGATCTTGA ACGCGGTCGA TGCTGCGGAG
ACCGGCCTGC GCGAGCAGCA GAGCGCGCTG CGCGGGACCT TGCGGGTCAC GGCGCCGCCG
GGGTTTGCCA GCCGCTATCT GGCGGTGCTG ACCAGCGACT TCGTGGCGCG GCATCCCCAG
GTGCGCATCG ATCTCGACCT CACGCACCGC ATGATCGACC TGGTCGAGGA GGCCGTGGAC
GTGGCCGTGC GCATGACCGA GCCGCAGGAC TCGAGCTTGA TCGCCCGGCG GCTGGCGCCG
GCGCCCTGCA TCGCCGTGGC CGCGCCGCGG TACCTGGCGG CGCGCGGACA GCCCGAGACG
CCGCGCGAGC TGCGCGCGCA CGATTGCCTG GTCGATACCA ACTTCCGCGA TCAGCAGCGC
TGGCGCTTTC GCGTTGGCGG ACGCACGCAG CGGGTCACCG TCGACGGGCC GTTTCGCGTC
AATAGCCCGC TCGCCGTGCG CGACCTGGCC ATCGCCGGAC ACGGCATCGC GATCGTCCCG
GCGCTGATCG CCGAAGCCGC GATCGCCACG GGCGAGCTGG TCGAGGTGCT GCCCGGGACC
GTGGCGCTGC GCTGGTCGAT CTACGCCGCG TATCCGCGCC GCGAGCATCT GCCCGAACGC
GTCCGCGCGT ATGTCGACCA CCTGGCCGAA GCGCTGGCCG TGCGCGCCTG A
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| Protein sequence | MDRLTAMYAF ARVVDAGSFS AAARRWGRSK AAVSKYVADL EAHLGVTLLR RNTRSLTLTE
AGAAYYPRCI EILNAVDAAE TGLREQQSAL RGTLRVTAPP GFASRYLAVL TSDFVARHPQ
VRIDLDLTHR MIDLVEEAVD VAVRMTEPQD SSLIARRLAP APCIAVAAPR YLAARGQPET
PRELRAHDCL VDTNFRDQQR WRFRVGGRTQ RVTVDGPFRV NSPLAVRDLA IAGHGIAIVP
ALIAEAAIAT GELVEVLPGT VALRWSIYAA YPRREHLPER VRAYVDHLAE ALAVRA
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