| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1334 |
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| Symbol | |
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| ID | 8543716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 1771188 |
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| End bp | 1771952 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646386049 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003265784 |
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| Protein GI | 262194575 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCATT ACGATTTTTC TGATCGCGTC GCCTTCGTCG TCGGCGGCAG CTCCGGTATC
GGGCTCGCGA CGGCGCTCGC GTTCGCGCGC TCTGGAGCGA GCGTGGCCAT CGCCGCCCGC
GGCGACCAGG CCGGTCAAGC TGCGTGCGCC GCGCTGGCAG GCGAGGGCGC GCAGGCGTTG
TTCGTCCAGA CCGACGTGCG TGAGGAGGAC GCGCTCACGC GCGCCGTGGC GCAGGTCGTG
GAACGCTTTG GCCGCCTCGA TTTCGCCGTC AACTGCGCCG GCGTCGGCGG CGATATGGCC
CCGCTCGAGC AGACCGATCA GCAGGTATGG GACGATGTCA TGGCCATCAA CGCCCGAGGC
GTCTGGCTGG GCATGCGTCA CCAGATTCCG GCCATGCTCG CGTCGGGCGG GGGAGCCATC
GTCAACATGA GCGCCATCTA CGGCGCTGCC GGCAAGGCCG CCCACCACGC CTACGTCGCG
TCCAAGCACG CGGTCATCGG CGTGACCCGC TCTGTGGCGC TCGAGTACGC GACCCGGGGG
GTCCGCGTCA ACGCGATCTG CGCCGGCGTC ACCCGGACGG ACGGCATGCG CCAGGCCGAG
GCCGCCGCGC CCGAGATGGT ACAGGCGCTG GTGGCGCAGC ATCCCATGGG ACGCATGGCC
AGTGAGGACG AGATCGCGGG CGCTGCGCTG TGGCTGTGCT CGGAGGGCGC GAGCTACGTC
ACCGGCGCCG CGCTCGCGGT CGACGGCGGC TTTCTGGCGG CGTGA
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| Protein sequence | MLHYDFSDRV AFVVGGSSGI GLATALAFAR SGASVAIAAR GDQAGQAACA ALAGEGAQAL
FVQTDVREED ALTRAVAQVV ERFGRLDFAV NCAGVGGDMA PLEQTDQQVW DDVMAINARG
VWLGMRHQIP AMLASGGGAI VNMSAIYGAA GKAAHHAYVA SKHAVIGVTR SVALEYATRG
VRVNAICAGV TRTDGMRQAE AAAPEMVQAL VAQHPMGRMA SEDEIAGAAL WLCSEGASYV
TGAALAVDGG FLAA
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