| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1312 |
|---|
| Symbol | |
|---|
| ID | 8543694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 1735865 |
|---|
| End bp | 1739542 |
|---|
| Gene Length | 3678 bp |
|---|
| Protein Length | 1225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646386028 |
|---|
| Product | amino acid adenylation domain protein |
|---|
| Protein accession | YP_003265763 |
|---|
| Protein GI | 262194554 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTCGA GCGACACCAC CTGGCGACCA CCTCTCTCAC TCGTCACGTG TTGGTTAATT
CCTATGGAAA GAGAAACGCC TATGAGCAAC TTGACCCATG CGGCTCAACA GAATACCCGG
CCAAATACGG TCGAAAACGC AGCGCCGACG AGCGACTCGG CCGAAACCAT CTGCGCACTC
ATCGCCCGGC GAGTGCAAAC GCATCCCGAG CGAACGGCGA TTATCGACGG TGATACTGAG
GTCGACTTCA AGCGGGTGAT GGATAGGGCC CATGCCGTGG CTGGCGCGCT GGCAGCCCGT
GGCGTACAGC CCGGCGCACT GGTTGGCGTA TGTATGGGGC GCACGTGGAG GCTGGTTGCC
ACCATGCTGG GGGTCCTGCA GGCGGGCTGT GCCTACGTGC CGCTCGACCC CGCGTATCCA
CGTGAGCGCG TGCGCTATAT GCTGGAGCAC TCTCGGGCGG TCGCCGCCAT CGTCGACCAC
GAGCGCGCCG CAGAGCTCTG CGCAGGGGTC AACGAGCTGT TGTGGTTCGA CAGGATCGCT
CAACACGCCA CGGATACGGT GAGGGGGCCG TCGCCGAGCG ACCTCGCTTA CGTCATCTAC
ACATCTGGAT CTACGGGTCG GCCCAAAGGC GTCGCGATCG AGCATCGCAA TGTAGTGGCG
ATGGTCCAGG CCATGGGCAA CTTGCTCGAT GACCAGGACC TGGAGGGCGT GCTTGCTGCT
ACCTCGGTTT GCTTCGACCC ATCTGTCATG GAGATTCTGG GCACCTTGTC ATTGGGTGGG
ACCGTCGTGC TGGCAAACAA CATGCTGGAC CTGCCCGCGC TAGATGCAGC GAATCTGGTA
ACGAGCTGTG TCGTCGTCCC ATCCGCCATA CAAGCGTTGC TGTCATCTGG GTGGATTCCC
CATGGTGTCA GGACGATTGT CTTTGGCAGT GAAGCGCTCA AGCAGCCACT CGTAGAGAAG
CTCTTTGCGC TGAATACGGG CGTCAGGGTG TTCAATGCGT ACGGCCCTAC CGAGGACACC
GTGTTCTCGA CGTCCACCGA GATCACCGAC GGCACCCAGA CCGTTACCAT CGGAACATCG
GTGCCCGGTT CCCGTTCATA CATTCTCGAC CGCGCCATGA ACCCCGTGCC GGATGGCATG
GAAGGCGAGC TATTCCTCGC CGGCAACAAG CTGGCGCGCG GTTATTTGTT CGACGAAGCT
CGCACGAAAG AGCGGTTCAT CGAGCAGGAG CCGAGGGACG CGGTTCCGGA GCAGCGTCTA
TACAGGACAG GAGACCTGTG CCGGAGGAGC GAGAACGGAG CGATTGAGTT TCTGGGCCGC
GTAGACCAGC AGGTCAAGAT CCGGGGGTTT CGAGTCGAAC TCGAAGAAAT CGAGCACGCA
CTCGAGTCCA TGGAAGGCAT CGATACCGCG GCGGCGGCGG CGGTAGATGG TGGCGTCGGA
CAGAAAGTGC TCACGGCATA TGTCGTGAGC CGGGACGACA CCATCACCGA TGAACAGGTG
AAAGCATACC TGGCGCAACG GATGCCCAGA TATATGGTCC CTCAGGTTGT CGTGCGCCTC
GAAGCCTTAC CGTGTTTGCC GAACGGAAAA CTAGACCGCA CTCGGCTACA GACCCTGGAA
GAAGCTCGCC GGACGGATAC GGGGCCCGGG GCCATGCAGA AACCCGGCGG ATGGATGCAA
CACCTGGCAA GTGCCGGAGC TGACCGGCAC GCCGTCATAC TCGCGGTCAT CCAGGGCGAG
GTTGCAGCGT TGCTGAATTA TCGTGATCCC GGCCAGGTCG CGCCGGAGCA TTCGTTCGAC
AGCCTCGGCC TCGATTCGCT GACGACCATC GAGCTGAGCA CGCGGCTTTC CAAGCTACTG
GGCCACGCGC TGCCAGCGGC AGCCCTCATC GAGCACCCCA CGCCTGCCGC CCTCGTCCAT
TACATTCTGA ATCTGGGCGG CGCAGAGCGC GATGCGGTGC AGAAAGGCCC CCGGGTGGCG
ACGGATTCCC TGGCCACCTT TCAGACACAG ATCCAGTCCA GTCATCCCAC CTTCCAGGCG
GCAAAAGTAT CTGCCTGGAG CGCCAACGAT AAAAGCAAGC TTGTCCAGCA AGTGCTGCAC
ATGGTGAACG ACCAGCGTAG AAACCCCTAC AGCAAGGTGC TCCGCACGGG CAGCGCCAGT
CGGGGCACCG TAAGTGACGC GTACAACGAC GAAGTGCAGG AAGAGGCGAT CATATGGACC
ACCAACTTGT ACCTCGGCCT GAACCGCGAC AGGCAGGTCA TGGAAGAGGC CGCCAACGCC
TTACGGCAAT TCGGTACCGG GATGGGGACC TCTGCGGCCG CTTCCGGTAT GACCGACCTT
CATTTGCAGT TTGAAAACGA ATTTGCCGAG CTGACAGGAA AACCCAGTGC CTGCCTTTTC
CCTACGGGCT ACACCGCCAA CGTCGGCGCT GTCGCCGGAC TTCTGGGCAG AAATGATGTC
GTCGTCATCG ACCAGCTCTG CCACGCATCT ATCGTGGACG GGGCTCGTCT TTGCGGTGCG
ACGATCCGAA CATTCAAACA CAATGATTCC TCCGATCTGG AAGCTGTGCT CGCGTCCGAG
GTATCGCCGT ACCGTTCCGT CCTGGTGGTA CTCGAAGGTG TGTACAGCAT GGGCGAAGGA
TCTGCGCCCG TCGCGAAGAT CGTACGCGCG GCCAAAAAAT ACGGCGCTCT CGTGCTGGTA
GACGAAGCCC ACTCGTTCGG ATTTTACGGC GAAGGCGGCG CAGGCATTTG TGCTGCCGAG
GGCATCACTG AAGAGGTGGA CTTCATCATG ACCACCCTCA GCAAAGCCCT GGGAAGTCTG
GGAGGGGTCG TCGCGGCATC CGAGGAGCAC GTGGACCTGA TCAAGGCCTC ATCCCGGGCC
TACATATTTC AGGCCTCGGT CAGCCCTGCC GATATGGCCG CAGCCCTTAC CGCCCTGCGC
CGGCTCCGCT CCGATGACAC CTTGCGGACG CGGCTCTGGG ATACCACTCG CTACATGCGA
AAGCGATTCG AAGATGCGGG CTACGATCTC GGCACAGGTG ACGGTCCTAT CGTCACGCCG
CACTTTCGCG ACAAAGATAA GCTCTACGCC ATCGTCCAGG AGTTGTACAA GCGCGGCGTG
CAAACCTCCG CAGTCACCTA TCCGATTGTA GAACCCGGCC GCGGTCGCCT CAGGCTTATC
TGCTCGGCTG CCCATACTCG GGACGATGTG GACAAGACCA TCGCGGCCCT TGTCGATGCA
GAACGTGTGG TCGATGAGCA GTTAGCCGCT GTTCAGGCGG AAGCCTGTGC GGCCCCCTTG
ACCCAATCCG ACATGAACGA GTGGGCCAAC GATTTCGCTG CCTATTTGAA AGACTCGCTG
GCACAGGCCG CTATGCCGGC ACCAGCGCTC GCCGTATCCG TACGGCTGGC CGACCAGGAT
GCACCCGTTA CCATCGTCGT CAACGAGGGC GACATCTCGT TAGACGTGGG AAAGGCGGCA
GAGCTTCCCA CCTGTTCATT CTTACTCAAA AGCGATCTGG CGGTTTCTGC CTTGCGTACA
TCGAACGTCC AGACCTTGCT GCACACCATA AGCAATGGCA CCTGCGTGTT GAGCGGCCAG
GTCGAGCCGT TCGTGTGGCT CATCGCCAGG ATGGTCGAAC TGCAACGAGA CACCAACGCC
GAAGGGCGTG GCGCCTAG
|
|---|
| Protein sequence | MPSSDTTWRP PLSLVTCWLI PMERETPMSN LTHAAQQNTR PNTVENAAPT SDSAETICAL
IARRVQTHPE RTAIIDGDTE VDFKRVMDRA HAVAGALAAR GVQPGALVGV CMGRTWRLVA
TMLGVLQAGC AYVPLDPAYP RERVRYMLEH SRAVAAIVDH ERAAELCAGV NELLWFDRIA
QHATDTVRGP SPSDLAYVIY TSGSTGRPKG VAIEHRNVVA MVQAMGNLLD DQDLEGVLAA
TSVCFDPSVM EILGTLSLGG TVVLANNMLD LPALDAANLV TSCVVVPSAI QALLSSGWIP
HGVRTIVFGS EALKQPLVEK LFALNTGVRV FNAYGPTEDT VFSTSTEITD GTQTVTIGTS
VPGSRSYILD RAMNPVPDGM EGELFLAGNK LARGYLFDEA RTKERFIEQE PRDAVPEQRL
YRTGDLCRRS ENGAIEFLGR VDQQVKIRGF RVELEEIEHA LESMEGIDTA AAAAVDGGVG
QKVLTAYVVS RDDTITDEQV KAYLAQRMPR YMVPQVVVRL EALPCLPNGK LDRTRLQTLE
EARRTDTGPG AMQKPGGWMQ HLASAGADRH AVILAVIQGE VAALLNYRDP GQVAPEHSFD
SLGLDSLTTI ELSTRLSKLL GHALPAAALI EHPTPAALVH YILNLGGAER DAVQKGPRVA
TDSLATFQTQ IQSSHPTFQA AKVSAWSAND KSKLVQQVLH MVNDQRRNPY SKVLRTGSAS
RGTVSDAYND EVQEEAIIWT TNLYLGLNRD RQVMEEAANA LRQFGTGMGT SAAASGMTDL
HLQFENEFAE LTGKPSACLF PTGYTANVGA VAGLLGRNDV VVIDQLCHAS IVDGARLCGA
TIRTFKHNDS SDLEAVLASE VSPYRSVLVV LEGVYSMGEG SAPVAKIVRA AKKYGALVLV
DEAHSFGFYG EGGAGICAAE GITEEVDFIM TTLSKALGSL GGVVAASEEH VDLIKASSRA
YIFQASVSPA DMAAALTALR RLRSDDTLRT RLWDTTRYMR KRFEDAGYDL GTGDGPIVTP
HFRDKDKLYA IVQELYKRGV QTSAVTYPIV EPGRGRLRLI CSAAHTRDDV DKTIAALVDA
ERVVDEQLAA VQAEACAAPL TQSDMNEWAN DFAAYLKDSL AQAAMPAPAL AVSVRLADQD
APVTIVVNEG DISLDVGKAA ELPTCSFLLK SDLAVSALRT SNVQTLLHTI SNGTCVLSGQ
VEPFVWLIAR MVELQRDTNA EGRGA
|
|---|
| |