Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1293 |
Symbol | |
ID | 8543675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 1701854 |
End bp | 1703077 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646386009 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003265744 |
Protein GI | 262194535 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.180985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.234354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGGGC TCGCCATGAC TCGGCGAAGC GTCCTCGTGC TGCTCGCGTT CGTCGCGTTC ATCAGCCTCG GCCTGCCCGA GGGGCTGCTC GGCGTGTCCT GGCCGTCCAT CCGCAACACC TTCGCGCTGC CGCTCGACGG CCTGGGTCTG CTCGTGAGCG CGACGACGAT CGGCTATCTG GGCTCGAGCT TCCTCGCGGG GCGGCTCCTG CGCGCCATGT CCATCGGCGC GCTGCTGGCG CTGTCCACGG CGGCGAGCGC CGTGGCTCTG CTCGGGTTTG CGTTCGCGCC GATCTGGCCC GCCATGCTCG TCGCGGCGCT GCTCGCCGGC TCCGGCGGCG GCGCTGTGGA CGCCGGCCTC AACGCCTACG GGGCCACGCA CTTCAGCGCC CGCATCCTCA ACTGGCTGCA CGCCTTCTTC GGCGTAGGCA CCACCATCGG CCCGCTCGTG GTCACGGCCG TGCTCGAGTC GGGTCGCGTG TGGCGCTGGA GCTACGGGCT CATGGGCGGC CTGATGCTGG CGCTGGCGCT GCTGTTCTAC CTCACCCGTC GGCGCTGGAA CCAGGTGTCC GAAATCGACG CCCCGGCGAC GCCGGCCACC GTCGTCGTCG CCGCCGCCAG CGGCGACACC CTGCGCCGGC CCGCGGTGTG GCTGGGTATG CTGACCTTCT TCTTCTACAC CGGCACCGAG TTGATCGCGG CGCAGTGGAG CTATTCGCTC TTTACCCTGG GCCGCGGCGT GCCCGAGGCG CGCGCGGGTC TGGCCGTCAG CTTGTACTGG GGCAGCTTGA CGGCCGGGCG GGTCCTGTTT GGCGCCATCG CCGAGCACGT GCCGCTGGTG CGGGCGCTGC GCCTGTGTCT CCTGGGCAGT ATCGCCGGCG CGCTCGCGGT GTGGCTCGCG CCCTCGCCCG TGTTCGGGTT CGCCGGCCTC ATGCTGATCG GCGTCTGCTT CGCGCCCGTG TTCGCCACCC TGATCCGCCT CACGCCCGCG CGCGTCGGCG CGGCGCACGC CGATAACGCC ATCGGCTTTC AGATCGCGTC GGCCGCGCTC GGCGGCGCAT CGCTCACTGC GCTGGTGGGC GTGGTCGCCG ACGCGCTTGG GCTCGAGGCC ATCGGCGTCG CCTTCGTCGT CTGCACCGTG GTCTTGTTCG GACACTTCGA GGTGCTCGTG CGCGCAAACC CGAGCAGCGC CGATGACGCA CCCGCTGTGA GCCGTGAGCC GTGA
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Protein sequence | MLGLAMTRRS VLVLLAFVAF ISLGLPEGLL GVSWPSIRNT FALPLDGLGL LVSATTIGYL GSSFLAGRLL RAMSIGALLA LSTAASAVAL LGFAFAPIWP AMLVAALLAG SGGGAVDAGL NAYGATHFSA RILNWLHAFF GVGTTIGPLV VTAVLESGRV WRWSYGLMGG LMLALALLFY LTRRRWNQVS EIDAPATPAT VVVAAASGDT LRRPAVWLGM LTFFFYTGTE LIAAQWSYSL FTLGRGVPEA RAGLAVSLYW GSLTAGRVLF GAIAEHVPLV RALRLCLLGS IAGALAVWLA PSPVFGFAGL MLIGVCFAPV FATLIRLTPA RVGAAHADNA IGFQIASAAL GGASLTALVG VVADALGLEA IGVAFVVCTV VLFGHFEVLV RANPSSADDA PAVSREP
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