Gene Hoch_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1274 
Symbol 
ID8543656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1679447 
End bp1681051 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content68% 
IMG OID646385992 
Producthypothetical protein 
Protein accessionYP_003265727 
Protein GI262194518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000455544 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000267355 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCAGTT TCGACGACAG ATCGCGACAG CGCTCGGACC ACGCGGCCGA CCTGCAACCG 
GTGCAAAAAG CCGAGCCCAA GGCGCCGGGC AAACGGGCCA CCAGCGCCGG CCTGACGCCG
GGCGCGCCCG CTGCGCCCGC GCCCGCTGCG CCCGCGCAGC GCAAGGCCGA TCCCGCGGCG
CAGGCCCTGC AAATGCAGCG CGAGACCATG ATCCAGCGCT GGACCCAGAC CGCCATGCGG
CCCGACCTGC ACCCCGCCCC GGTGCAGCGC GTAGCGGCGA CGAGTGCGCC GGAGGAGGGC
TTGCCGTCCG ACGGTGCCGG TCGCGCCATG CCGGCCGCGG TCCAGGCCAA GATGGAAAAC
GCATTCTCCG CGGACTTCTC GTCGGTACAG CTCTACGAGG GTTCGCGCGC CGAAGCGCTG
GGCGCGCGCG CGTATACCCA GGGCTCGGAT ATCCATTTTG CTCCGGGCGC CTACCAGCCG
GATTCGCACT CGGGCCAGGA GCTGCTCGGG CACGAGCTGG CCCACGTGGT GCAACAGTCC
CAGGGGCGCG TAAACCCGAC CACGCAGCTC AAAGGCGTGG GCGTGAACGA CGACTCGGCG
CTGGAGCGCG AGGCCGATGA GATGGGCGCC AAGGCCGCGC GCGGCCAGCC GGCCAGCGGC
GCGAGCGCGT CGGCCACAGG CGCAGCCGCG GGCGGCGCCG CGGGCGTGCA GATGAAGCGC
TCGCCGCTGA GCCCCCAAGG CGGCCAGACC GTGCAGCGCG AGGTCGACAC CGCCACCCAG
GGCAAGGGCA GCAACAAGCG CACGGTATAC TTCTCGACGC TCGACCCCAA CCCGTTCCGA
CCCAAGATGT TCTCGACCCG TGAAGAGGCC GAAGCGCACG ACCGCGAGCT CGAGTCGCAA
CAAAAACAGG CGGCGAAGAA GCCCGAGCCC GAGGTCTCCG CGATTCAGGT GGTCGAGCCC
AAGGTCGACG AGTCCGAGGT CGTCGAGCCC AAGGACTCGG GGATTCAGAT CATCGAGTCC
GCGCCCAAGC CCAAGGCCAA GCCCAAGGCC GAGCCGGTCT CGGGCTTGAC GCTGTCCCAG
ATGAACAGGA CCTGGGAGCA AGCTCTCGCG CGCAAGCAGG AAGAAGTCAT CGCCGCCATG
CAGCAGTTCG TGCCCGACTT CACCGCGCTG GCCGCGGATG CCGAGGTCCG CATCCGCGGC
AGCCTGGCGA GCGGTGTCAA AGGGCCCAAC AAGACCAGCA AGACCAACGA GCGGCTGCTC
TTCGATCCCA CCGACTTCGA CATCGACGCC TACGTGGAGA GCGATACGCT CTACGGCGAG
GCGCTGAAGG CCGACAAGAC CAGCGATGAG GTCGTGCGCG GCCAGATCGC GGGCTCACGC
CACCCCAAGG TGAACGAGAT CATCCGTCGC ATGCGAACCG AGCTGGCCAA GGTGACCGGC
AACCGCGACG CGCCGCCGGA GAGCCAGTAC AAGTTCAACG TGCTCATCCG CTCGTCGCGA
AATGCCAGTT TCAAAACCTA CCAGGATCGC AAAGCCATGA GCGATCTCGG CGAGAATCCC
AACTACGGCA ACCCCTTGAA TGTACCGCCC CCAGACGACA AATAA
 
Protein sequence
MSSFDDRSRQ RSDHAADLQP VQKAEPKAPG KRATSAGLTP GAPAAPAPAA PAQRKADPAA 
QALQMQRETM IQRWTQTAMR PDLHPAPVQR VAATSAPEEG LPSDGAGRAM PAAVQAKMEN
AFSADFSSVQ LYEGSRAEAL GARAYTQGSD IHFAPGAYQP DSHSGQELLG HELAHVVQQS
QGRVNPTTQL KGVGVNDDSA LEREADEMGA KAARGQPASG ASASATGAAA GGAAGVQMKR
SPLSPQGGQT VQREVDTATQ GKGSNKRTVY FSTLDPNPFR PKMFSTREEA EAHDRELESQ
QKQAAKKPEP EVSAIQVVEP KVDESEVVEP KDSGIQIIES APKPKAKPKA EPVSGLTLSQ
MNRTWEQALA RKQEEVIAAM QQFVPDFTAL AADAEVRIRG SLASGVKGPN KTSKTNERLL
FDPTDFDIDA YVESDTLYGE ALKADKTSDE VVRGQIAGSR HPKVNEIIRR MRTELAKVTG
NRDAPPESQY KFNVLIRSSR NASFKTYQDR KAMSDLGENP NYGNPLNVPP PDDK