| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0551 |
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| Symbol | |
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| ID | 8542931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 743607 |
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| End bp | 744740 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385345 |
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| Product | Peptidoglycan-binding lysin domain protein |
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| Protein accession | YP_003265082 |
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| Protein GI | 262193873 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.161209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA TACGAGCAAG CAGCGGTCAT CCTCCTCTCG TCCCCTCGAC GGAGTCGAAC
GCCCCGCCGC GACGCTCGGC GCCCGCGCAG CGCCGCACGC TCCGCATCGG CTGGCTGCGC
GCGACCCTGG TGGCCGCGTG TGCGCTGCTG GCCTCGAGCA GCGACGCCCG CGCCGAGGGC
AAAGGCCGAG CGCACGTGGT CGAGGCCGGA CAGACGCTGT GGGAGATCGC CCAGTCCTAC
GGCTGCAAGG TCGATGAGCT GCAGGCGGTC AACGAGATCG ATGGTCTGCT GATCCAGCCG
GGCCAGCGCC TGCGGGTGCC GCGGTGCAAG CAACAGGGCG GCAGCAGCAG CAAGGGGCTG
CACGTGCTCA GCCACGAGGT GAGCAGCGGG GACACGCTGT ACGAAATCGC CCGCCGCTAC
GACACCAGCC TCGATGACCT GCGTCGCCGC AACGACATCA AGGGCAACGT CATCCACCCC
GGCCAGACCC TGCGCGTGGC CGTGGGCAAG GACGGCGAGG GTCGCCCGGT GGCCGGCCAG
AGCGTGGGCT CGGTGGTCCG CGGTCGGCTG GTCAACGGCA TGCAACTGCC CGAGGGCCGC
GGCTACTACC GCCGCCGTCC GCATCGCGCC TGGGGCGCCA GTCACACGAT TCATCACATC
CGGCGCGCGA TCGCGTCGGT GCGCAATCGC CTGCCCAAGG TCCACGAGGT CGCCATCGGC
GACATCTCGA CGCACGATGG CGGCCAGCTC GCCGACCACC GCTCGCACCA GTCGGGGCGC
GACGTCGATA TCGGCCTGTA CTACAAGAAG CGGCCGCGCG GGTATCCCAA GAGCTTCATC
CGCGGCGACC AGCAGAACCT CGACCTGCAG GCCACCTGGG CGCTCATCGA GGCGCTGGCC
AACACATCCA AGGTCGCGGG CGGGGTCGAC ATCATGTTCC TCGACTACGA CCTGCAGGGA
CATCTGTACA AGTGGGCGAA AAAGCACGGC GTGTCCAAGC GCAAGCTGGG CGAGATCCTG
CAGTACCCGC GCGGCGAGTC GTCGGCCAGC GGTCTGGTGC GGCACGAGCC CGGACACGCC
ACCCACGTGC ACGTCCGCTT CAAGTGCCCC AAGAGCGACG AGAAGTGCTG GTGA
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| Protein sequence | MSTIRASSGH PPLVPSTESN APPRRSAPAQ RRTLRIGWLR ATLVAACALL ASSSDARAEG
KGRAHVVEAG QTLWEIAQSY GCKVDELQAV NEIDGLLIQP GQRLRVPRCK QQGGSSSKGL
HVLSHEVSSG DTLYEIARRY DTSLDDLRRR NDIKGNVIHP GQTLRVAVGK DGEGRPVAGQ
SVGSVVRGRL VNGMQLPEGR GYYRRRPHRA WGASHTIHHI RRAIASVRNR LPKVHEVAIG
DISTHDGGQL ADHRSHQSGR DVDIGLYYKK RPRGYPKSFI RGDQQNLDLQ ATWALIEALA
NTSKVAGGVD IMFLDYDLQG HLYKWAKKHG VSKRKLGEIL QYPRGESSAS GLVRHEPGHA
THVHVRFKCP KSDEKCW
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