Gene Hoch_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0545 
Symbol 
ID8542925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp734455 
End bp735099 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID646385339 
ProductGTP cyclohydrolase II 
Protein accessionYP_003265076 
Protein GI262193867 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TGGTAATGCA GAAACCCCGC TCCGTCTCGC TCGAGAAGTA CGCGACGTCG 
AAGCTGCCCA CGATCCACGG GCAATTCGAG GTCACCGTAT ACCGCTACGG CCCCGACAGC
GAGGAGGCGC TCGCCGTCAC GCTGGGCAGC TTTGCGCCCG ACGAACCGAC CTTCGTCCGC
GTGCACTCCG AGTGCTACAC CGGCGAGGTG CTCGGCTCGC TCAAGTGCGA CTGTCGCGAG
CAGCTCGAGT TGGCGCTCAC GCGCATCCAG GAGCTGGGCA GAGGCGTGCT CGTGTACCTG
CGGCAAGAGG GCCGCGGCAT CGGCCTGGGC AACAAGATCC GCGCCTACGC GCTGCAGGAT
CAGGGCGCCG ACACCGTGCA GGCCAACCAT CAGCTCGGCT TCGCCACCGA CCTGCGCGAG
TTCGACGTCG CCGCCGAGAT CCTCAAAGAC CTGGGCGTCG CGCGCATCCA CCTGCACACC
AACAACCCCG AGAAGATCCA GGCCATGGAG GATCACGGCA TCGAATTGGT GTCGCGCGAG
CCCGCCCACG GCGTGATCAA TCCCCACAAC CGCCGCTACC TCGAGACCAA GCACCACACC
CTCGGCCACG ACTTCGCGGC GCTGCTCTCC GGCCCCAAGA AATAA
 
Protein sequence
MKNLVMQKPR SVSLEKYATS KLPTIHGQFE VTVYRYGPDS EEALAVTLGS FAPDEPTFVR 
VHSECYTGEV LGSLKCDCRE QLELALTRIQ ELGRGVLVYL RQEGRGIGLG NKIRAYALQD
QGADTVQANH QLGFATDLRE FDVAAEILKD LGVARIHLHT NNPEKIQAME DHGIELVSRE
PAHGVINPHN RRYLETKHHT LGHDFAALLS GPKK