Gene Hoch_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0506 
Symbol 
ID8542886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp687464 
End bp688558 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content72% 
IMG OID646385301 
Productbiotin synthase 
Protein accessionYP_003265038 
Protein GI262193829 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGT CCCCCTTCAC CGCTGGTCCC TGGCACGAGT TCGCGGCCCG TTCTCTGGCC 
GGTGAGGCGC TCTCGCGCGA GGAGTGCCGG GCGGTCCTGG CCGCGCCCGC CGACGCCACC
CTGGCGCTGC TCGACGCCGC CTTTGCCGTG CGCCGCGAGC ATTTCGGCCG CACGGTCCAC
ATCCACGTGC TCGAGAACGC CAAGCGCGGC TCGTGCCCCG AGGACTGCAG CTTCTGCTCG
CAGAGCAAGC GCTACGGCAG CCCGGGCGGC GAGGGGCCGA TGAAGAGCGT CGAGGAGCTG
GTCGACGGCG CCCGCCGCGC GGCCGCGTCG CAGGCCAAGC GCTACTGCAT GGTCACGGCC
ACGCGCGGCC CCTCGGGGCG CGATCTCGAC GTCATCTGCG AGGCCTCGCG GCGTATCAAG
GACGAGTTCC AGCTCGAGAT CTGCGCCTCG CTCGGCCTGC TCACGCCGGA CAAGGCCAAG
CGCCTGGCCG AGGCCGGCGT CGATCGCTTC AACCACAACC TCGAGACCAG CGAGCGCTAC
TTCGGCAAGG TCGTGAGCAC GCACTCGTGG GACGATCGCG TGGCCACCCT GCGCATGGCC
AAAGAGGCCG GCATGACCAC CTGCTGCGGC GGCATCGTCG GCCTGGGCGA GAGCGAGGAC
GATCTCATCG ACCTGGCGCT GTCGCTGCGC GAGCTGGCCG TGGACTCGGT GCCGCTCAAC
TTCCTCGACC CGCGCCCGGG CACCCCGCTC TCGGCGCGCG AGCAGATCTC GCCGATGTAC
GCGTTGCGGG CGCTGTGCCT GTTCCGCTTC CTGCATCCGC GCGCCGATCT GCGGGTCGCC
GGCGGCCGCG AGGTGGTGCT GCGCGCGGCC CAGTCCATGG CCCTGTACCC GGCCAATTCG
CTATTCACCT CTGGCTACCT CACCACCGAC GGCGCCATGC CCGACCACGA TCATCAGATG
ATCCGCGACA TGGGTTTCGA GATCGAGCTG GTCGGCGGCG CGGCGCCGCC GGCGCCCGAG
CCCGTGGCGC CCGCGCCGGC TGCCGCCGGG CCCTCGTTGC CGGTACTGAG CCAGCGCCCC
GGCCCCGCGG CCTGA
 
Protein sequence
MHASPFTAGP WHEFAARSLA GEALSREECR AVLAAPADAT LALLDAAFAV RREHFGRTVH 
IHVLENAKRG SCPEDCSFCS QSKRYGSPGG EGPMKSVEEL VDGARRAAAS QAKRYCMVTA
TRGPSGRDLD VICEASRRIK DEFQLEICAS LGLLTPDKAK RLAEAGVDRF NHNLETSERY
FGKVVSTHSW DDRVATLRMA KEAGMTTCCG GIVGLGESED DLIDLALSLR ELAVDSVPLN
FLDPRPGTPL SAREQISPMY ALRALCLFRF LHPRADLRVA GGREVVLRAA QSMALYPANS
LFTSGYLTTD GAMPDHDHQM IRDMGFEIEL VGGAAPPAPE PVAPAPAAAG PSLPVLSQRP
GPAA