Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0501 |
Symbol | |
ID | 8542881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 681488 |
End bp | 682777 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646385296 |
Product | Peptidoglycan-binding lysin domain protein |
Protein accession | YP_003265033 |
Protein GI | 262193824 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCGGA TTTCCACCTT AGTCATCGCG GCGCCGCTGC TGCTCGTCGG AGCGCGCGGC GCCTTCGCCC AGGATGTGCC CCAGACCCTC GAGCCCGGCG TGACCGCGCC GGCTCGGTCC GCGCCCGCAC CGGCGCCCGC GCCGGCGCCC GCGCCGCAGC CGCAGACCGT CGTCATCCCC GTGCCTGAAG GCACCACGCT GCCGCCGCCG GCCGAGGATG AGAGCGGGTT CTTCTACCTG CCCGACGACT TCGTCACCGA TCCTCAGCAG GAGGGCTTTC AGCCCGGCCC CGCGCCCGAG GTTCACGAAG TGCGCAGCGG CGACACGCTC TGGGATATCT GCTTTTTGTA CTTCAACAAT CCCTGGGATT GGCCGCGGAT CTGGTCGTAC AACCCCGAGA TCACCAATCC CCACTGGATT TATCCCGGCG ATCTCGTGCG CCTCTACGCC GAGGGCGAAG GCCCCCGGGT CAACGACCTC ACGCCGCTCG ACAACCTGCC CGTGGATCCC GAGGGCGACT TCGAGGACCC CGAGGCGCCG CTGATCGTCG GCAATCAGAA CCCGCGGCCC TCGCGCGACG AGGGTGTGCG CCTGCGCCAG CTCACCTTCG TGGGCCAGGA GGTGCGCGAG AACTCGTTCA CCATCGTCGG CGCCATCGAG GAGCGCAGCC TGCTCTCGGC CGGTGACTCG GTGTATCTCG AATACCCCGA GGACCGCCCG CCCGAGCAGG GCAAGCGCTA CGCCATCTAC ACCGAGACCG TGCCGGTGCG GCATCCCGAC AACAAGAGCG CGGTCACCGA CGTCGGCAGC TACGCGCGCA TTCTCGGCGA GCTGCAGGTG GTGAGCGTGC GCGAGGGCAA ACGCGCGCGC GCCTTCATCA CCGACTCCTT CGACGTCATC GAGCGCGGCG ACAAGGTCGG CCCGCTGCGC AGCACCTTCC GCACGGTCGA GCCCCAGCCC AACGAGGTCG AGCTGCAGGG CACCCTCGTC GCCCTGGTCG GCGGCGAGCA GCTCATCGGC GAGAACCAGG TGGTGTTTCT CGACCGCGGG TCCGAAGACG GCCTGCGCGT CGGCAATCGC CTCTACGTCG TGCGCCGCGG CGACGCCCGC GGCACCACGA CCTCGTACTT CGAGGGCATC GGCCAGAACG ACCAGCGCTT CCCGGCGCGC GCCATCGGCG AGGTCATGGT GGTCGAGACC GGCAAGAAGG TGGCCACCGC CCTGGTCACC CTGTCGCTGC AGGAATTCGG CGTCGGCGAC CGCGTGCTGA TGCGCAAGAC CGCGCCCTGA
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Protein sequence | MGRISTLVIA APLLLVGARG AFAQDVPQTL EPGVTAPARS APAPAPAPAP APQPQTVVIP VPEGTTLPPP AEDESGFFYL PDDFVTDPQQ EGFQPGPAPE VHEVRSGDTL WDICFLYFNN PWDWPRIWSY NPEITNPHWI YPGDLVRLYA EGEGPRVNDL TPLDNLPVDP EGDFEDPEAP LIVGNQNPRP SRDEGVRLRQ LTFVGQEVRE NSFTIVGAIE ERSLLSAGDS VYLEYPEDRP PEQGKRYAIY TETVPVRHPD NKSAVTDVGS YARILGELQV VSVREGKRAR AFITDSFDVI ERGDKVGPLR STFRTVEPQP NEVELQGTLV ALVGGEQLIG ENQVVFLDRG SEDGLRVGNR LYVVRRGDAR GTTTSYFEGI GQNDQRFPAR AIGEVMVVET GKKVATALVT LSLQEFGVGD RVLMRKTAP
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