Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0420 |
Symbol | |
ID | 8542800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 580174 |
End bp | 580809 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646385217 |
Product | ApaG domain protein |
Protein accession | YP_003264954 |
Protein GI | 262193745 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2967] Uncharacterized protein affecting Mg2+/Co2+ transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.416529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCC GTCCCAAGCG CTATTTGCAG AGACTGGTAT ACCGCTTCGT GAGCTCGCTG CTGCGCTGGC AGGAGCCCGA AGACGACGAC GATCTGGCCG CCGCGAGCGG CTCTCCGCCG GGGTCCGACC CGCGGGCCAG GCGCGGCGCC GCGGCCGCAG AGACGGGCGA CACGCCGCTT GCGTCGCCGG CGCCGGCGCG GCAAAGTCGG GCGGTGCCAA CGCTTGTCGC AGAGCCGACC TCGAACGTGA TTACTGAGGG AATCCGGGTC ACCGTGCGCT CGGTGTACCT CCCCAACCAG TCCGAGCCCG AGGATCAGCG CCACGTCTTC GCCTATACCG TGTCGATCAG CAACGAGGGC CAACGGCCGG CCCAGCTCCG CACCCGCCAC TGGATCATCA CCGACGGCAA CGGCCAGGTG CAGGAGGTCA AGGGCCCCGG CGTGGTCGGC GAGACCCCGC GGCTCACGCC CGGCCAGTCG TTTCAGTACA CCTCGGGCTG CGTGCTCAAG ACCCCGGTGG GCACCATGCA CGGCACCTAT CAGATGTACC GCGACGACGG CAGCCAGTTC GACGCCGAGA TCGCGCCCTT CACCCTGGCC ATGCCGCACA GCGACGACGG CCGGCTCATG AACTGA
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Protein sequence | MRRRPKRYLQ RLVYRFVSSL LRWQEPEDDD DLAAASGSPP GSDPRARRGA AAAETGDTPL ASPAPARQSR AVPTLVAEPT SNVITEGIRV TVRSVYLPNQ SEPEDQRHVF AYTVSISNEG QRPAQLRTRH WIITDGNGQV QEVKGPGVVG ETPRLTPGQS FQYTSGCVLK TPVGTMHGTY QMYRDDGSQF DAEIAPFTLA MPHSDDGRLM N
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