Gene Hoch_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0415 
Symbol 
ID8542795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp572623 
End bp573696 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content76% 
IMG OID646385212 
Producttransport system permease protein 
Protein accessionYP_003264949 
Protein GI262193740 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.920967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC GCGGCTTCAT CGGCGCCTCG GCCGGACGCC TCACCCGCGG CCGCCTGCTC 
GCCGCCCTGG CGCTGGGCGC GCTGCTCACC GCGCTGCTGG CCGCGCTGGC CCCGCTCCTG
GGCGTGGCCA CCAGCGGCCC CGCGACCCTG TCCCTGCTCG ACCCCGGCGC GCTCAGCGCC
GGCCCCGGCA GCGACGCCAT CGCCGCCCGC ATCTTCTGGC ACTCGCGCCT GCCGCGGGTG
CTGGCCGCGC TGCTGGTGGG CTCGGGCCTG GCCGCGGCCG GCTGCGCCTT TCAGGCCGTG
CTGCGCAACC CGCTGGCCGA GCCCTTCACC CTGGGCATCT CCTCGGGCTC GGCGCTGGCC
GCCGTCATCG CCGTGCGCCT GGGCTGGGAG ACCTCGCTGT TGGGCGGCTC GGCCGTGGGC
CTGTCGGCGC TCGCGGGCGC CGGCCTCACC GTGGTGCTGG TGTGGCTGCT GTCGCGCGTC
GACGGCACCC TGCCGCCGGC CACCATGTTG CTCGCCGGCA TCACCATCTC GATGTTCTGC
TCCGCGGCCT CGCTGCTGGT GCAATACACC GCCGACTTCG GCGAGATCGC GCGCATGATC
CGCTGGATGA TGGGCGGCCT CGACTGGATC GGCTACCAGC GCCTGGCCCG CGCCGCCGTG
CCCATGGCGC TGGGCCTGGC CGTGATGCTG GCCCTGGCGC GCTCGCTCAA CGCCATGAGC
GCGGGCCCCG ACGCCGCCGC CTCGGTGGGC GTGGACGCCA GCCGGACCAC GGCCGTGGCC
TTTGTCGTCG CCTCGCTGCT GGTCGGCGCC GGCATCGCCC TGGCCGGCCC CATCGGCTTT
GTCGGCCTGC TCGTGCCCCA CGCCCTGCGC GCGCTCGTCG GCCCCGACCA CCGCGTGCTG
CTGCCGATGT CGATGCTCGC CGGCGGCGCC CTGCTGGTGG TCTGCGACAC CCTGGCCCGG
CTGCTGCTCA TGCCCGACCA GCTCCCCGTG GGCGTGGTCA CCGCCCTGCT CGGCGGCCCC
TTCTTCCTGT TCATCCTGCT GCGCGAGAAG CGCCGCGGCG GCCTGTGGAG CTGA
 
Protein sequence
MSARGFIGAS AGRLTRGRLL AALALGALLT ALLAALAPLL GVATSGPATL SLLDPGALSA 
GPGSDAIAAR IFWHSRLPRV LAALLVGSGL AAAGCAFQAV LRNPLAEPFT LGISSGSALA
AVIAVRLGWE TSLLGGSAVG LSALAGAGLT VVLVWLLSRV DGTLPPATML LAGITISMFC
SAASLLVQYT ADFGEIARMI RWMMGGLDWI GYQRLARAAV PMALGLAVML ALARSLNAMS
AGPDAAASVG VDASRTTAVA FVVASLLVGA GIALAGPIGF VGLLVPHALR ALVGPDHRVL
LPMSMLAGGA LLVVCDTLAR LLLMPDQLPV GVVTALLGGP FFLFILLREK RRGGLWS