Gene Hoch_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0378 
Symbol 
ID8542758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp524557 
End bp525192 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID646385175 
Productimidazole glycerol phosphate synthase, glutamine amidotransferase subunit 
Protein accessionYP_003264912 
Protein GI262193703 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0648789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG TCACCGTCGT CGATACCGGC TCGGGCAACC TGCGCTCGGT CACCAAGGCG 
CTGGCCCACG TCGGCGGGCA GCCGATTCTC AGCGCGGATC CCGACGTCAT CCGCCGCGCC
GAGCGCCTGG TGGTACCCGG GCAGGGCGCG TTCGGCGCCT TTGTCGCGGC CATGCACGAG
CGCGGGCTCG AGGACGCGCT GCGCGAGGTC ATCGCCGCGG GGCGGCCGTT TCTCGGCATC
TGCCTGGGCT TGCAGGTGCT CTTCGACGAC AGCGAGGAGC AGGGGCCGGT GCCCGGGCTG
GGCGTGCTGC CCGGCCGCGT GGTGCGCTTC CGGCCGCGCT CGCACGCCTA CAAAGTGCCG
CACATGGGCT GGAACCAGGT GACGCGGCCG CCCGAGCGCG CTGACGCGGC TGCCGATCCG
GTGCTCGCCG GTATCGACGA CGGCACCTAT TTCTATTTCG TCCATTCGTA CCACGTCGCG
CCGGCCGACG AGTCCAGCGT GGTGCTGTGG TGCGAATACG AGACTCGCTT TGCCGCGGCG
GTGCGCAAGG ACAACCTCTT TGCCTGCCAG TTTCATCCCG AGAAGAGCCA CGCCCCTGGG
CTGCGGCTCC TGCGCAACTT CGTGACTGCA CCATGA
 
Protein sequence
MSAVTVVDTG SGNLRSVTKA LAHVGGQPIL SADPDVIRRA ERLVVPGQGA FGAFVAAMHE 
RGLEDALREV IAAGRPFLGI CLGLQVLFDD SEEQGPVPGL GVLPGRVVRF RPRSHAYKVP
HMGWNQVTRP PERADAAADP VLAGIDDGTY FYFVHSYHVA PADESSVVLW CEYETRFAAA
VRKDNLFACQ FHPEKSHAPG LRLLRNFVTA P