Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0320 |
Symbol | |
ID | 8542700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 456916 |
End bp | 457638 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646385117 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003264854 |
Protein GI | 262193645 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACAG CCCTGATCAT CGGCAGCTCG GACGGCATCG GCCTGGCCCT GGTGCGCGCG CTGCTCGCCC GCGGCTATCA GGTCGCCGGG CTGTCGCGCA GCCCGCTGCC GGCCGAACGC GTCGGCGACG GCGCCGAGCG CTACCAGCAC CTGGCCCTCG ACGTCCGCGA CCCGGCGTAT CGCGCGCACG TCGCCGAGCT GTGCCAGCGC TTGGGCGCGC TCGACCTGTG CATCTACGCC GCCGGCATCG GCGACTCGCT CGCGCTCGAC CAGTTGGACG AAAACGCTCA CCTGGCCGGC GAGCGGCCGG TGTTCGCCGT CAACCTGATG GGCCTGGTCG ACTGCATCGA GGTGGTGCTG CCGCGCATGC TGGCCCGCGG CCGCGGCCAT ATCATCGGCC TGTCGAGTCA GGCCGACGGC TTCCCCGACG GCGGCGCGCC CAGCTACGGC GCCTCCAAGG CCGGCATGTC GGCGTATCTC GAGCGTCTGG CGCTGGCCGT GCGCGCGCGC GGCGTGGCCG TGACCAATGT CCGCCTCGGC TTCGTCGATA CCAAGATGGC AAAGGCGGAC GTGCGTCCGT TTTTGATCAC GCCCGAGGCC GCGGCCGAGC GCATCCTGCG CTGCCTGCGC CGCAAGCCCA TCCGTGTCAC CCACCCGTGG CGCATGGCCG CGCTGCTGTG GCTGGTGGCG TGGCCCGGGC GGCTGCGCAT CTGGCTATCC TGA
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Protein sequence | MPTALIIGSS DGIGLALVRA LLARGYQVAG LSRSPLPAER VGDGAERYQH LALDVRDPAY RAHVAELCQR LGALDLCIYA AGIGDSLALD QLDENAHLAG ERPVFAVNLM GLVDCIEVVL PRMLARGRGH IIGLSSQADG FPDGGAPSYG ASKAGMSAYL ERLALAVRAR GVAVTNVRLG FVDTKMAKAD VRPFLITPEA AAERILRCLR RKPIRVTHPW RMAALLWLVA WPGRLRIWLS
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