Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0268 |
Symbol | |
ID | 8542647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 397065 |
End bp | 397748 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646385064 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003264802 |
Protein GI | 262193593 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.509377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCGG CCCGCATCCT CGTCGCCGAC GATGAATCCA ACATCCGCGA CGTCGTCCAG TACGCGCTCG AACGCGACGG CTATCGCGTC GAGACCGCGG CCGACGGCCA GAGCGCGCTC GCGCGCATCG AGGCCGGCGG CATCGATCTG GTGATCCTCG ACGTGCTCAT GCCCGAGCTC GACGGCCTCA ATCTGTGCCG CAAGCTGCGC GAGCGCGGCG ACGTGCCCAT CATTTTTCTG TCCTCGCGCA GCGAGGAGGC CGACCGCATC CTGGGCCTCG AGCTCGGCGG CGACGACTAC GTGACCAAGC CCTTCAGCCC GCGCGAGCTG GCCACCCGGG TCAAGGCCGT GTTGCGCCGC GTGGCTGCCC GCCGCGGCGC CGATGACGCG CCCCCGGCTC TGGTCTACGA GCGCCTCACC CTCGACCCCG CGGCCCACGA GCTGCGCGTG GACGACGACA AGATCGCGCT CACGGTCACC GAGTTCCGCG TCCTGCACGC GATCCTCGAA CGCCCCGGCC GGGTGCTCAC GCGCTCACAG CTCATCGACC GCGCGTACGA GGACGGTCTG CACGTGAGCG AGCGAACCAT CGACACGCAT ATCCGCCGTA TCCGCGCCAA GCTGCGCCCC TACGGCATCG AGGCGATCGA GACCGTCCAT GGACTCGGCT ACAAAACCCC CTGA
|
Protein sequence | MNPARILVAD DESNIRDVVQ YALERDGYRV ETAADGQSAL ARIEAGGIDL VILDVLMPEL DGLNLCRKLR ERGDVPIIFL SSRSEEADRI LGLELGGDDY VTKPFSPREL ATRVKAVLRR VAARRGADDA PPALVYERLT LDPAAHELRV DDDKIALTVT EFRVLHAILE RPGRVLTRSQ LIDRAYEDGL HVSERTIDTH IRRIRAKLRP YGIEAIETVH GLGYKTP
|
| |