| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0253 |
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| Symbol | |
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| ID | 8542632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 375938 |
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| End bp | 377593 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646385049 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003264787 |
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| Protein GI | 262193578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC ACGTCTTCCT GACCGGCTTC ATGGCCACCG GCAAGAGCAC GGTTGGCCGC
CAGCTCGCCG CCCGCCTGCG GCGGCCCTTT CTCGATCTCG ACGACGCGGT CGAAGCCGAG
GCCGGCCACA CCGTGGCCGA TATCTTCGCC AGCGAGGGCG AGATCGGCTT TCGTCGCCGC
GAGCGCGCCG CCCTGCAGCG CATCGCCGAC GGACCCGCGG CCGTCATCGC CACCGGCGGG
GGCGCTGCCT GTCACGGCGA CAACCTGGCG CAGATGCGCC GCAGCGGCTT GACCATCGCG
CTCACGGCGC CGCTGGCGAC CGCCCGCGCG CGCGCCGACG CCGGCGAGCG CGAGCGGCCG
CTCCTGCGCG CCACCGAGGC CGAGCTCGAG GCCCTGTACC GCTCCCGCGA GCCGATGTAC
CGCCAGGCCC ACGCCTGCGT GCGCACCGAG GACAGCGAGC CCGCGCTGTT GGCCCGCGAG
ATCGCGGCCC TGGTAGCGCG CGCCGAAACC CTGCCCGACG ACGCCCAGGA GCAGGCGAGC
TGGGTGGCGC TGCGCGAGGG CGCGTATCCC GTGGTCGTCG CCGAGGGCGG CAGCGATCGC
GTGGGCACCT GGCTGCGCAG CGTGCTCGGC GAGCGGCGAC CGAGCCGAGT TGCCGTGGTC
TCGGACGACA ACGTGGCCCC GCTGCACGGC GAGCGCGTGC GCCGGGCGAT CGACGGCGCC
GACCTGTGCG AGAGGCCGTG CTCGCTGCAC ACCGTGGCAG CCGGCGAGCG CTCCAAGCGC
TTCGAGGTAT TGGGCCGACT GGTCGACGAG CTGGTCGCCG AGGGCCTCGA CCGCAGCTCG
CTGGTGGTCG CCCTGGGCGG CGGCGTGGTC GGCGATCTGG CCGGCTTCAC GGCCGCGTGT
CTGTATCGCG GCGTGCCCGT GGTGCAGGTG CCGAGTACGC TGCTGGCCAT GACCGACGCC
GCCATCGGCG GCAAGACCGG CATCGACATC GCGGCCGGCA AGAATCTGGT CGGCGCCTTC
TGGCAGCCGC GCATGGTGGT CGTCGATCCC GCGCTGCTGG CGACCCTGCC CGCGCGCGAG
CTGCGCGCCG CCTTCGGCGA GCTGATCAAG TACGGCCTGC TCGACGGCGA GGAGCTGTAC
GCGCGCATCG AGGCGCTCGC CGACGCGCTG GCGGCCGCCG GGGACGAGCC CGGCGCGGCG
CTGTCGCCCG CGTTCACCGA GATCATCCGC CGCTGCGCCG CGATCAAATG CTGGATCGTC
ACCCGCGATC AGCGCGAGCA GACCGGCGAG CGCGCGCTGC TCAACCTCGG CCACACCGTG
GGCCACGCCA TCGAGGCCGC CTGCGCCTAC GAGGGCATGC TGCACGGCGA GGCCGTCGCG
CTCGGGCTGG TGGCCGCGTG CCGGGTCTCG GCGCGGCTCG GACAGTGCGC GGACGGGCTC
GAGGAGCGGG TGCGCGCGAC CGTCGAGCGC GCCGGCCTCG ACGCTGATCT CGACCGCTGG
CTGCGCGGCG ACGACGCCGA GCGGGTGTTG GGATTTCTGG CCACAGACAA GAAGCGCGCT
GGCAAGCGCA TCGGTTTCGT CACCATCGGC GCGATGGGCG ATTGCGGCAT CACGCCCATC
GAACTCGCAG AACTGGTGAG AATTTTGCGC CCCTAG
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| Protein sequence | MPRHVFLTGF MATGKSTVGR QLAARLRRPF LDLDDAVEAE AGHTVADIFA SEGEIGFRRR
ERAALQRIAD GPAAVIATGG GAACHGDNLA QMRRSGLTIA LTAPLATARA RADAGERERP
LLRATEAELE ALYRSREPMY RQAHACVRTE DSEPALLARE IAALVARAET LPDDAQEQAS
WVALREGAYP VVVAEGGSDR VGTWLRSVLG ERRPSRVAVV SDDNVAPLHG ERVRRAIDGA
DLCERPCSLH TVAAGERSKR FEVLGRLVDE LVAEGLDRSS LVVALGGGVV GDLAGFTAAC
LYRGVPVVQV PSTLLAMTDA AIGGKTGIDI AAGKNLVGAF WQPRMVVVDP ALLATLPARE
LRAAFGELIK YGLLDGEELY ARIEALADAL AAAGDEPGAA LSPAFTEIIR RCAAIKCWIV
TRDQREQTGE RALLNLGHTV GHAIEAACAY EGMLHGEAVA LGLVAACRVS ARLGQCADGL
EERVRATVER AGLDADLDRW LRGDDAERVL GFLATDKKRA GKRIGFVTIG AMGDCGITPI
ELAELVRILR P
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