| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0248 |
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| Symbol | |
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| ID | 8542627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 369043 |
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| End bp | 370089 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646385044 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_003264782 |
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| Protein GI | 262193573 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAA ACTGTATCGG ACTCGACATC GGATCGAGCA GCATCAAAGC GATCCAACTC
AAGAAGCGCA AACGCGGGCT CGAGGTCTGT GCATTCGGCA TGGAGCCGCT GGCGCCTCAG
ACCATCGTGG ACGGGACGAT CATGGATCAG ACCGCCGTGG TCGAGGCCAT CCGCGCGCTG
TGGAAGCGGC TCAAGCTGCG GCAAAGAGAC GTCGCCATCG CCATCGCCGG GCACTCGGTG
ATCATCAAGA AGATCAGCGT GCCGCGGATG AGCTCGAACG AGCTTGCGGA GCAGATTCCG
CAGGAGGCCG AGCACCACAT TCCGTTCTCG CGCGACGACG TCGAGATCGA CTACGAGGTG
GTGCTCGAGG AGAACCTCAG CGGCCAGATG GACCTGCTGC TGGTGGCGGC CAAGAAGGAC
GTGGTCGCCG ACTACACGCA GGTGGTCAAG GACGCCTCGC TGGTGCCGCA GGTGGTCGAT
GTGGCCGCGT TTACGGCTCA GAACGGCTTC GAGGCCAACT ACCAGCTACG CGACGACGAG
ACCGTCATCC TCATCAACAT CGGTGCGGCG ATCTCGAACA TCAACATCAT CCGCGGCACC
CAGAGCCTGT TCACGCGCGA CGTGACCATC GGCGGCAACC TGTTCACCGA GGAGCTGCAG
AAGCAGCTCA GTCTGTCGTA CGAAGAGGCC GAGGCCTACA AGGTCGGCGG CGGACCCAAC
GAGCAGGGCG TGGTGCCGGA GCCGGTGGAG CAGGTGATCG AGAGCGTCGC CGACGTCATG
GCTGGCGAGT TTCAGCGCTC GTTGGATTTC TTCCTGGCGA CCTCGGCGGA GACCAACGTC
ACCCGCGTGT GTCTGGCCGG CGGGACATCC AAGGCCCCGG CTCTGCACCG GGCCATCGCG
CAGCACTCGC GCCTGCCGGT CGAGGTCATC GACGCCTGGC GCAACGTGTC CATCAACGCG
TCGCTCGACA GCGATTTCCT GGCCGCCCAC GCCCCCGAGG CACTGATCGG GGTCGGGTTG
GCGCTGCGCG CGGGCAACGA CAAGTGA
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| Protein sequence | MAKNCIGLDI GSSSIKAIQL KKRKRGLEVC AFGMEPLAPQ TIVDGTIMDQ TAVVEAIRAL
WKRLKLRQRD VAIAIAGHSV IIKKISVPRM SSNELAEQIP QEAEHHIPFS RDDVEIDYEV
VLEENLSGQM DLLLVAAKKD VVADYTQVVK DASLVPQVVD VAAFTAQNGF EANYQLRDDE
TVILINIGAA ISNINIIRGT QSLFTRDVTI GGNLFTEELQ KQLSLSYEEA EAYKVGGGPN
EQGVVPEPVE QVIESVADVM AGEFQRSLDF FLATSAETNV TRVCLAGGTS KAPALHRAIA
QHSRLPVEVI DAWRNVSINA SLDSDFLAAH APEALIGVGL ALRAGNDK
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