Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0208 |
Symbol | |
ID | 8542587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 310880 |
End bp | 311191 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646385004 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_003264742 |
Protein GI | 262193533 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACA AAAATAGCAT CAAGCGCGAG GACAACGGAG ACGACACCAC GATCTCCATC ACCGGCAAGC TCGACGTGCT GACCGCGCCC GAGATGAGCA CGCTCATCGA CGGCCTCGTC GCCGAGAAGC GCCGCAAAGT AGTCGTCGAT CTCTCCGGAC TCGATCTCAT CGACAGCTCC GGTGTGGCCG CGCTGGTCGG GATGTACAAG CGCGTCCGCG CCGAGGGCGG CGACGTCACG ATCCGCGGGA TTCGCGACCA ACCCCTGGCG ATCTTCAAAC TCCTGCGAAT GGACAAGGTG TTCAACCTCT GA
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Protein sequence | MSNKNSIKRE DNGDDTTISI TGKLDVLTAP EMSTLIDGLV AEKRRKVVVD LSGLDLIDSS GVAALVGMYK RVRAEGGDVT IRGIRDQPLA IFKLLRMDKV FNL
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