| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0133 |
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| Symbol | |
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| ID | 8542512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 204206 |
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| End bp | 205543 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646384929 |
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| Product | WD40 domain protein beta Propeller |
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| Protein accession | YP_003264667 |
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| Protein GI | 262193458 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGT TTCAAATTTC CGTACTAGCC AGTCGTCGCG CTGTCGCTGC TCTCGCCGTT
CTCCTCATGG CTCTCACGCT GGGGCCGGCC CGGTCGTCGG CCCAGCAGAG CGGCGTGGTC
ATCGAACTCG AGAACCCCAA GCGCGGTCTG TACCCGATCG CCATCCCACG CAGCGTCGCC
GCCGACGCCG CGCAGGCCGA AGAGGCGCAG AAGGTCATGG ACTTCGACCT CGCGGTCTCG
GGCTGGTTCG AGGTCCTCGA CCCGCGCTCC TTCCTCGCCG ACCTGCGCAC CGAGGGGCTC
GGCATCCAGC CGCAGAAGTG GAAGGACGTC GGCGCCTTCG GCGTGATCAA GCACCGCATC
TCGCGCTCGG GCAACCAGTA CACCTTTGAA GGACGCCTGT ACGAAGTCGA GAAGGGCAGC
GCCGCGGTGC TGATCAAGAC CTACCGCGGC GGCGACCTGC GCGCCCTGGT GCACAACTTC
TGCAACGACG TGGTCGAGCA CTACACCGGC GAGCGCGGCT TCTTCGGCTC GAAGATGGCC
TTCGTCACCC GCGGCAGCGG CGGCAAGCAG GTCATGGCCA TGGACTTCGA CGGCCACGGC
GTCCGCTCGC TCACGCGCAA CTCCTCGCTC AACATCCTGC CGAGCTGGTC GCCCGACGGC
AGCAAGGTCG CGTTCACTTC GTACATGCGC AACAACCCCG ACCTGTACGT GGTCGGCGCT
GGCGGCGGTC GTCCCAACCG CATCAGCAAG CAGTCGGGCA TGAACACGGG CGCCTCGTGG
TCGCCCGACG GCAGTAAGAT CGCGGTCACG CTGTCCAAGG ACGGCAACCC CGAGATCTAC
ATCATCAGCG CCAGCTCGGG CGCGATCCTG CAGCGGCTCA CCAACGACCG CGCCATCGAC
ACCTCGCCGG CGTGGTCGCC CGACGGCCGC GAGATCGCGT TCGTCTCCGA CCGCCACGGC
GGCCCGCAGA TCTTCGTGAT GAGCGCGGCC GGCGGCAGCC CGCGCCGGGT CTCGCGCAAC
GGCTCCTACA ACACCACGCC GGTGTGGTCG CCGCGCAAGG ACAAGCGCAT GCTGGCGTAC
ACCACGCGCG ACGGCGGCAC CTTCGACATT GTCACCCTCG ACCTCGGCAC CGGCGACATG
GTGCGCATCA CCCAGGGCCA GGGCAGCAAC GAGGAGCCGA GCTTCTCGCC CAACGGCCGC
GCCATCGCGT TCGCCTCCGA GCGCCGCGAA GGCGCCGGTA TCTACATCGC CAACGCCGAC
GGCAGCGGCA CCCAGCGCCG CGTCTACAGC GGCGTCGCCA CCTCGATCGA CTGGGGCCCG
GCGCCGCGCG GACAGTGA
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| Protein sequence | MDMFQISVLA SRRAVAALAV LLMALTLGPA RSSAQQSGVV IELENPKRGL YPIAIPRSVA
ADAAQAEEAQ KVMDFDLAVS GWFEVLDPRS FLADLRTEGL GIQPQKWKDV GAFGVIKHRI
SRSGNQYTFE GRLYEVEKGS AAVLIKTYRG GDLRALVHNF CNDVVEHYTG ERGFFGSKMA
FVTRGSGGKQ VMAMDFDGHG VRSLTRNSSL NILPSWSPDG SKVAFTSYMR NNPDLYVVGA
GGGRPNRISK QSGMNTGASW SPDGSKIAVT LSKDGNPEIY IISASSGAIL QRLTNDRAID
TSPAWSPDGR EIAFVSDRHG GPQIFVMSAA GGSPRRVSRN GSYNTTPVWS PRKDKRMLAY
TTRDGGTFDI VTLDLGTGDM VRITQGQGSN EEPSFSPNGR AIAFASERRE GAGIYIANAD
GSGTQRRVYS GVATSIDWGP APRGQ
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