Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0114 |
Symbol | |
ID | 8542489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 179070 |
End bp | 180632 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646384906 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_003264648 |
Protein GI | 262193439 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCC TTTACGTCAT TCTGGCCATC CTCGGCGGCA TAACCGTCGG GGTGGGAATC GCGCGGCTCG CCGGCATTGG CCGCAACGCC GCGGCTGAGC GCGCCGCCGA GGCCGAGGCC CGCAGGATCA TCACCGCCGC CGAGGCCGAG GTCGAGGAGA TCAAAAAGGC CGCCGAGGTC GAGGGCAAAG AGCTGGCCTT CCGGCTCAAA GCCGACGTCG AAGAGGGCAC CCGCAAACGC AGGGCCGAGC TCGTCCAGCA GGAGGAAGCG CTGCTGGCGC GCGAGCGCGA GATGGAGCGC AAGCAAAAGG ACGCCAGGCG CCTCGAGGGC GAGCTCGAGA AGCGCGAGCG CTCGATCGAT GGCCGCGCCA AAGCCGCCGA GGCCATGGCG CGCAAAGCCG AGGCCTCGCA GGACAAGGCC AAAGCCATGC TCGAGGAGAT CGCGGCGCTG ACCGCCGAGC AGGCGCGCGA GCGGCTCGAG GATCAGATCC GCGAGCAGGC GCGCGAAGCC GCAGCCGCCG AGGTCAAACT CATCGAGGAG AACGCGGCCA AAGAGGCCGA CTCGCGCGCC AAGGAGATCG TGGCCACCGC GATTCAGCGC TACGCCAGCG AGCTGGTGCA GGAGCGCACA GTGTCGGTCA TCCCCCTGCC CTCGGACGAC ATGAAAGGCC GGCTGATCGG TCGCGAGGGT CGCAACATCC GCGCGCTCGA GGCCGCCACC GGCATCGACA TGATCATCGA CGACACCTCG GAGGTGATCA CCATCTCGTG CTTCAACCCC GTGCGCCGCG AGATCGCGCG CCTGGCCATC TCCAAGTTGG TCGCCGACGG CCGCATCCAC CCCACGCGCA TCGAAGAGGT GGTCAAGAAA GCCGAAGCCG AGATCGAGCG CACCTGTAAA GAGGCCGGCG AGCAGGCGGT GTTCGACCTC GGCTTGCACC GCGTCTCGCC CGAGCTGATC GTGCAGCTCG GACGCCTCAA GTACCGGGCC TCGTACGCGC AGAACCTGCT CATGCACTCG GTCGAGGTCG GCTTCCTCGC CGGGCTGATG GCCGCGGAAG TGGGCCTCAA CGTCAAGCAG GCGCGCCGCG CCGGACTGCT ACACGATATC GGTAAATCGG TGGATCACGA GCTCGAGGGC TCGCACGCGC AGGTGGGCGC ACAGATGGCG CGCAAGTTCG GCGAGTCGGC CAAGATCTGC CAGGCCATCG CCGCGCACCA CGGCGACCCC GAGCCGAGCA GCGTTCTCGA CCACATCGTC GACGCTGCCA ATCGGCTTTC GTCCGCGCGT CCGGGAGCGC GTCGCGAGCT GCTCGCCTCC TACGTGCAGC GGCTCGAAAA GCTCGAGCAC ATCTGCAACG GCTTTGGCGG CGTGACCAAA TCCTTCGCGC TTCAGGCCGG GCGCGAAGTG CGCGTGATGG TCGAAAACGA CAAAGTCGAT GACGCCCAGG CGCTCATGCT GTCGAAGGAC ATCGCGCGCA AAATCGAGAC CGAAGCCACC TACCCGGGTC AAATCCGCGT GGTCGTGGTA CGCGAGACCC GCGCCAGCGA TTACGCGCGT TGA
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Protein sequence | MQFLYVILAI LGGITVGVGI ARLAGIGRNA AAERAAEAEA RRIITAAEAE VEEIKKAAEV EGKELAFRLK ADVEEGTRKR RAELVQQEEA LLAREREMER KQKDARRLEG ELEKRERSID GRAKAAEAMA RKAEASQDKA KAMLEEIAAL TAEQARERLE DQIREQAREA AAAEVKLIEE NAAKEADSRA KEIVATAIQR YASELVQERT VSVIPLPSDD MKGRLIGREG RNIRALEAAT GIDMIIDDTS EVITISCFNP VRREIARLAI SKLVADGRIH PTRIEEVVKK AEAEIERTCK EAGEQAVFDL GLHRVSPELI VQLGRLKYRA SYAQNLLMHS VEVGFLAGLM AAEVGLNVKQ ARRAGLLHDI GKSVDHELEG SHAQVGAQMA RKFGESAKIC QAIAAHHGDP EPSSVLDHIV DAANRLSSAR PGARRELLAS YVQRLEKLEH ICNGFGGVTK SFALQAGREV RVMVENDKVD DAQALMLSKD IARKIETEAT YPGQIRVVVV RETRASDYAR
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