| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0081 |
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| Symbol | |
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| ID | 8542452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 126986 |
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| End bp | 129286 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646384869 |
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| Product | capsular exopolysaccharide family |
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| Protein accession | YP_003264615 |
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| Protein GI | 262193406 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.80701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGC CCTCGACACA CTCCCCCGCT CGCCAGGAGA CCGCCGCGTC GCCGCCGGGT
GCGATCCTCG AAGACGAGCG GCCGGCGCTC GATCTCGCCC GCTACTGGCG CGTGGTGCGC
AAGCGCGCGT GGCTGATCGC GGCCGTGGTC GCCGTCGGCG TGACCGCGTC GGTCCTGTAC
ACGCGCAGTC TGCCCAAGAT CTATCAGGCC ACGGCCAGCG TGGTCATCGA CCCGACGCCG
CCCCAGGTCT TCGGCAGCCA GGTGCAGGAG GTCATCCAGC TCGGCGCCCA GAGCTACTGG
TCCAATCAGG AGTACTACAA CACCCAGCTC GAGATCTTCA CCCGCTTCGA CCTGGTCGAG
CGCACGCTGG CCCGCCACCC CGAGCTGATC GATCTGGTCC TGGCCACCGA GATCCCGGGC
GCGCGCTCGG CCGGTGGCGA TCGCGATGGC GGCGATAGCG ACGGGGTCGC CGATGACCCG
CTGAGCCTGG CGACCGAGCG CCTGGCGGCC CTGCTCACGG CCACGCAGAC GCGCGAGAGC
CGCGTGGTCC GCCTGCGCGC GCAGCACACC GAGCCCGCGG TGGCCGAGCA GCTCGCCAAC
TATCACGTCG ATACCTTCCT CGCCTATCAC CGCAACCTGC GCGGCGAGAA CACCGAGCAG
ATCACCGAGT TTCTCGACCA GGAGCTGGTG ACCTCGGCCG ACGACCTGGA AAACGCCGAG
CGCGCGCTGC TGGCGTTCAA GAAGGACAAC GACATCCTCT CGGTGTCGAT CGAGGACCGG
CAGAACATCC TCGCCGCCGA CATCGCGCGC TACAACGCCG CGCTCAGCGA CGCCCGCATC
GAGCGCATCG AGCTGGGCAC CATCCTCGCC CGCGCCCGCG CGCTCGAGGG CGAGGCCATC
ATGGAGTCGC CGATCTTCGC GCTGGCCTCG TCCACCGACA TGGTCGAGGA GCTCAAGGCC
CAGTACATCC GCGAGAAGCA CAAGCTGGCC GAGCTGAGCC AGGAGCTGGG GCCGCGGCAT
CCCGCCTACC AGGCGCAGAA CGAGAAGGTC GAGCAGCAGT ACGCGGCCAT CGAGGCCGAG
GCCCGGCGCG CGCTGCGCGA GCTGAGCGAG CGCCATCAGG CGGCGCTGGC CCGCGAGCGC
CAGCTCGGCG CCGAGCTCGA GCGGCTCAAG GCCGAGGCCT TCGAGCTGGG CGACAAGACC
GCCGTGTACA AGCAGCTCGA GCGCAAGCAG CACAGCGAGG AGGAGAAGTA CAATCTGGTG
CTCAGCCGCC TGGGCGCGAG CCAGCTCAGC GAGCGCAACA CCGCCAGCAA CGTGCACCTG
CACATGCGCG CGCGCTCGGC CGAGCTGGTG TATCCGCGCG TGGCCGTCAA CCTCGGCCTG
GGCGGGGTGC TGTCGCTGCT GCTGGGGCTG GGGCTGGCCT TCTTGCTCGA CTTCTTCGAC
CGCACCATCA AGTCGCCCGA GCAGGTCGAG CAGGCCACGG GCGCGCCGCT GCTGGGCATG
ATCCCGGCCG TCGAGGCCGC GGGCGAGGGC GCGGACGCGG ACCGGGACCG CGCGCGCGAT
CTCTTCGTGT TCGACAAGCC GCGCTCGGCC GTGGCCGAAC ACTGCCGCTC GATCCGCACC
AACATCCTGT TCAGCACCGC CATGCGGCCG ACCAAGGTGC TCACGATCTC GAGCCCGCGG
CAGGGCGAGG GCAAGACCAC GACCGCGATC TACCTGGGCA CGATCATGGC CCAGAGCGGG
CAGCGCGTGC TGCTGGTCGA CACCGACATG CGCCGGCCGC GCCTGCACCA GAGCCTGGGC
ACGGGCACGG CCACGGCGCA CGGGCTCAGC GAGCTGCTGC TGCCCGAGAC CCGGATCGCC
GACAAGCTCG ACCAGGTCAT CGTCGAGACC GCGGTGCCCG GGCTGTTCTT GCTGCCCTGC
GGCGCGGTGC CGCCCAATCC CGCCGAGCTG CTACTCACCG AGCGCTTCGG CGAGGTGCTG
GACGCGCTGC GCGAGCGCTT CGACCGGGTG CTGCTCGATT CGCCGCCGCT GATGCTGATG
AACGACGCGG TGGTGCTGTC GCGGCGCTCC GACGGCGTGG TCATGGTCGC ACGCGCGGGC
CGCACCGCGG TCGAGGACCT GAGCCGCTCG GGGCGCATGG TGCGCGACGT CGACGCGCCG
GTCCTGGGCG TCATCCTCAA CGGTGCCAGC ACCGCGCGCG GGCGCTACGG CGGCTACGAG
CGCTACGGCT ACGCGGGCGA TGACGAGGAC GGCGGCGAGC TCCGCTCCAG CGGCCGCGAT
GGCGCGGAGC GGGCGGCATG A
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| Protein sequence | MSPPSTHSPA RQETAASPPG AILEDERPAL DLARYWRVVR KRAWLIAAVV AVGVTASVLY
TRSLPKIYQA TASVVIDPTP PQVFGSQVQE VIQLGAQSYW SNQEYYNTQL EIFTRFDLVE
RTLARHPELI DLVLATEIPG ARSAGGDRDG GDSDGVADDP LSLATERLAA LLTATQTRES
RVVRLRAQHT EPAVAEQLAN YHVDTFLAYH RNLRGENTEQ ITEFLDQELV TSADDLENAE
RALLAFKKDN DILSVSIEDR QNILAADIAR YNAALSDARI ERIELGTILA RARALEGEAI
MESPIFALAS STDMVEELKA QYIREKHKLA ELSQELGPRH PAYQAQNEKV EQQYAAIEAE
ARRALRELSE RHQAALARER QLGAELERLK AEAFELGDKT AVYKQLERKQ HSEEEKYNLV
LSRLGASQLS ERNTASNVHL HMRARSAELV YPRVAVNLGL GGVLSLLLGL GLAFLLDFFD
RTIKSPEQVE QATGAPLLGM IPAVEAAGEG ADADRDRARD LFVFDKPRSA VAEHCRSIRT
NILFSTAMRP TKVLTISSPR QGEGKTTTAI YLGTIMAQSG QRVLLVDTDM RRPRLHQSLG
TGTATAHGLS ELLLPETRIA DKLDQVIVET AVPGLFLLPC GAVPPNPAEL LLTERFGEVL
DALRERFDRV LLDSPPLMLM NDAVVLSRRS DGVVMVARAG RTAVEDLSRS GRMVRDVDAP
VLGVILNGAS TARGRYGGYE RYGYAGDDED GGELRSSGRD GAERAA
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