Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0039 |
Symbol | |
ID | 8542409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 69717 |
End bp | 70760 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646384827 |
Product | hypothetical protein |
Protein accession | YP_003264574 |
Protein GI | 262193365 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTTCGC GGGCGAGCAT CGGTACGAGC ACGGGCGCGA GCGTGCGTAC GCGCACCGTG TCGGCGGCGC GGGCGCTCGC GTTGCTGTGG CCCAAGCCCG CGCGCGGACA GCCGCGTCCG AGTTCCCCTG GGGAACATGC ACACCTGTCC GAACTCGTCG CGCTGTTGGG CCGCGGTGTG GCGGTCGGAG CGCTGCCGCA GGCGGCGGCG GTGGCGGCAC GGCGGGCCGG GTTTGCGCTT GAGCTGTGGA CCGTGCCTGG CGCGGAGGGC ACGGGCCGTG ACTACTGGGT TGTGCGCGAA CCCGCGGGCC AGCGCCGCGG CGTGGGCTGC TACGTGTTCC GAGCCGGCTG CGCGGGGGCG GGGGCGGCGC ACGGGCCGGG GACGCGCGCA TTGATCGTGC AAGCGCCGCA CGCGTACTTC GAATTCGGCA CCGGCGCGCT CGCTGCCGAG GCCATGTTCC TGTTCGGCGG TCTGCTGAGC CCTCCGCCGC TCGCGTTGAT GGGCAACTCC CTGCACCGCA ATCGCGGTCG CCAGGGCGAG GAGCACGCCG CATCGGAACC CGCTGACGGA GACGCGGGCG CGCGCGCACC AGGGCAGCGC GTGCGCGGGT TCGGCCCGGC CGATGTCTGT CATCAGCGCG CGCATCCGTT TCAGACGGCG ACCGCGGCGC TGGCCGAGCT CGGGCCAGCC GTGTTCGTGC AGGTGCACGG CTTTGCCGGC GCCGGTGAGC GCAGCGGCCG CGAGCGCTAT CCCGACCTGG TGGTCAGCGC CGGTGAGCGC GCGGCGTCGC GGCCGACGAG CACGGCGCTG GCCCGGGAGT TCGCCGCCCA GCTCGAGGGC GTGCGCGTGC GCCGCTACCC CGAAGAATTC TCGGCTCTGG GCGCGACCAC CAATGTCCAG GGCCGGCTGC TGCGCGGGCG GGCCGGCATC GACTTCGTAC ACCTCGAGCA CAGCGCCTCG CTGCGCCGCG CGCTGCTCGC AAGCGACGAG CTGCGGCAGC GCTGGGTGCG CGCGCTCGGG GCGGCCGTGG GCGCGGGCTC TTGA
|
Protein sequence | MGSRASIGTS TGASVRTRTV SAARALALLW PKPARGQPRP SSPGEHAHLS ELVALLGRGV AVGALPQAAA VAARRAGFAL ELWTVPGAEG TGRDYWVVRE PAGQRRGVGC YVFRAGCAGA GAAHGPGTRA LIVQAPHAYF EFGTGALAAE AMFLFGGLLS PPPLALMGNS LHRNRGRQGE EHAASEPADG DAGARAPGQR VRGFGPADVC HQRAHPFQTA TAALAELGPA VFVQVHGFAG AGERSGRERY PDLVVSAGER AASRPTSTAL AREFAAQLEG VRVRRYPEEF SALGATTNVQ GRLLRGRAGI DFVHLEHSAS LRRALLASDE LRQRWVRALG AAVGAGS
|
| |