| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0018 |
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| Symbol | |
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| ID | 8542388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 20714 |
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| End bp | 22099 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646384806 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003264553 |
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| Protein GI | 262193344 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.709029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.924426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCCGC TCATGGCCCG CTCTACGCTG CTCGTCATCG ACGATGAACC CAATATCCTG
ACCACGGTCC GGCGCGCGCT CGAGCTCGAG GACTACCGCG TCGAGGTCGC TGGCTCGGGC
GCGATCGGCC TCGAGAAGCT GGCCGAGAGC GATATCGACC TGGTCCTGCT CGACGTGGTG
ATGCCGGGCA TGGACGGTCT CGAGGTGCTG CGCCAGGTGC GCGAGCGCCA CCCGGGCGTG
TTCGTGGTCA TGATGTCGGG CAACGCCTCG ATCGAGACCG CGGTGCAGGC CACCAAGGGC
GGCGCCCACG ACTTCATCGA GAAGCCGCTG AGCAGCGACA AGCTGCTGCT CACGGTGCAG
AACGCGCTGT CCTTTGCCGA GCTGTCGCGT GAGAACGCGC GCCTGCGCGC CCGCGCGCAC
GGCGAGTTCG CCATGATCGG CTCGAGCTCG GTGATGCGCT CGATCTTCGA CAAGATCGGC
AAGACCGCGC CGACCATGGG CCGGGTGCTG ATCACGGGCG AGAACGGCAC CGGCAAGGAG
CTGGTGGCGC GCGCCATCCA CGAGCACTCC AAGCGCGCGG GCGGGCCCTT CATCAAGCTC
AACTGCGCCG CCATCCCCAG CGAGCTGATC GAGAGCGAGC TCTTCGGCCA CGAGAAGGGC
GCGTTCACGG GCGCCACCCA GCAGCGCCGC GGCAAGTTCG AGCTGGCCGA CGGCGGCACC
CTGTTCCTCG ACGAGGTCGG CGACATGAAC CCGAGCGCTC AGGCCAAGGT GCTGCGCGCG
CTGCAGGAGA ACGAGATCGA GCGCGTCGGC GGCAGCCAGG TCATCGGCGT GGACGTGCGC
GTGCTGGCGG CGACCAACAA GAACCTCGAG GAGGAGATCG CGGCCGGGCG CTTTCGCGAG
GACCTGTTCT ACCGGCTCAA CGTGGTGCCC ATCGAGCTGC CGCCGCTGCG CGAGCGGCGC
GTGGACATCG CCGACCTGGT CGAGCACTTC CTGAGCGTGG TGTGCGAGGC CAACGACCGC
AAGCGCAAGC GCGTCGAGCC CAGCGCGGTG TCGATGCTCA TGCAGTATGA GTGGCCGGGC
AACATCCGCG AGCTCAAGAA CGTGGTCGAG CGCCTGGTCA TCCTCACCGG CGAAGAGGAG
TGCATCGGCG AGGCCGACGT GCAGGACGCG CTGCCCCGGG TCAAGACGGT CAAGGCCGGC
CACCGCGCCG GAGTGGCGCT CAAGGAGCTG GTCGCCGCGG CCGAGCGCAC CATCATCCTC
GAGGCCCTGC AGGCCAACGA GAACCACATC TCGAACACGG CCAAGGACCT GCAACTCGAG
CGCTCGCATC TGTACAAGAA GATGAAAGCG CTCGGCATCG ACCCGCGCGC GGGCGAGAGC
GAGTAG
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| Protein sequence | MGPLMARSTL LVIDDEPNIL TTVRRALELE DYRVEVAGSG AIGLEKLAES DIDLVLLDVV
MPGMDGLEVL RQVRERHPGV FVVMMSGNAS IETAVQATKG GAHDFIEKPL SSDKLLLTVQ
NALSFAELSR ENARLRARAH GEFAMIGSSS VMRSIFDKIG KTAPTMGRVL ITGENGTGKE
LVARAIHEHS KRAGGPFIKL NCAAIPSELI ESELFGHEKG AFTGATQQRR GKFELADGGT
LFLDEVGDMN PSAQAKVLRA LQENEIERVG GSQVIGVDVR VLAATNKNLE EEIAAGRFRE
DLFYRLNVVP IELPPLRERR VDIADLVEHF LSVVCEANDR KRKRVEPSAV SMLMQYEWPG
NIRELKNVVE RLVILTGEEE CIGEADVQDA LPRVKTVKAG HRAGVALKEL VAAAERTIIL
EALQANENHI SNTAKDLQLE RSHLYKKMKA LGIDPRAGES E
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