Gene Hoch_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0007 
Symbol 
ID8542377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9660 
End bp11042 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content71% 
IMG OID646384795 
Producthypothetical protein 
Protein accessionYP_003264542 
Protein GI262193333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAG TGACGCAAAT GATGCGATTG ACGCTGCTGT CGTTGTCGCT GTCTGCGCTG 
GTCGCGTGCG GCGGAGCGGC GCCGACGCCG GTCACGCCCG ACAGCGGCTC GACGAAACCG
GACATCGGTC CGATTCCCGA TGAGATGCCG CCCGAGCGCG CGTTTCTCGA GGCCGAGGCC
GAGGCCGACA GCGAAGAGGA GGCCTACGCT GCCGCGGTGT CCGAACTCGA GGAGCTGGTC
TACGGCGACG AGGGCTGGCT CCGCGAGGGC GCGCTGCCGG TGCACGAGCC CGGCAGCGAC
CCGATGTATC GCACGGATAG CGAGGGCGGC GGCGAGGGCG GCTTGGTGCG CGTGGTCGTC
GGGCTTGAGC GCGAGCGCGT CGATGCGCTG CTGCAAGAGC TGAGCTCGCA GCCCATGCCC
TCGTCCGTGC CCGCGACTCT GGCGCCCTCG CTCGAGTCGG CCTACGGCTT GTACATCGAA
GCGCTGGTGT GCGAGCGGCG GCGCGAGCTG CTCGACGACA GCTCGTGTCA CGCGCCCGGC
GAAGACGAGA TCCGCGCCAA CCTGCAGCGC GTGGCCGACG ACATTCACAT CCGCACGCGC
TTCGAGGGCG GTGTCCCGCT CGACCGCAAT CGCCAGCCGC TGCGTCCGCT CGAGGTCTTT
GTCGAACGTG TGTCCGGCAA AACCACGCGC ACGCCGCTGC CGGCGCTACC CGTGAGCGTG
CAGCAGCCCG AGGGCGAGGA CGCGCTCAGC TACGCGGTCG CGGTCACCGA CGAGCACGGT
CTGGCGCGCT TCAGCTTCCG CGAGGGCGCG CGCTTCAGCA AGGGGCTGCG CGTGAGCCTC
GACCTGGGCG ATCCGCTGGG TCCGCTGGCC GAGCTGTGGC CGGATAGCGA GATGGTGCCG
CTGGGGCGCG AGGTCGGTCT GCGGCGCTGG GCCGTGATCG CCGAAGAGCG CGTGCAGGGC
AGCGAGGTCG GCGACAAGGT GTTCGTCCAG AGCCTCGATG AGAGCATGCA GGCGGCCGGC
GGCGTGGCCC GCGTGAGCTT GCCCAGCGCG GTGCGCGGCG AGATCGAGAA GGCCGGCTCG
AGCGCGCTCG AGGCCATGTT GCCCGCGATC GCCGAACGCC TGCAGGGCCA GGTCGATGTG
CTGGTCGTGG CCGAGCTCGA CAGCGAGTAC GCCAGCCGCA TGGGCGCGTA TCGCGTGTGG
TACGAGGCCC GCGGCCGCGC CAAGGTCTAC GATATGTGGA CCGGCGCGCT GCTGGCCGCG
GTCGAACACA CGGTGACCGC CACCGGCGTG GGCGACGAGC GCGCCGACCG CGAAGCACGC
GCCAAGCTGG GCCAGCAGTT CGCCGGCTCG CTGGCCCAGG TCAAAGCCGT CGAGCAGCCC
TGA
 
Protein sequence
MMRVTQMMRL TLLSLSLSAL VACGGAAPTP VTPDSGSTKP DIGPIPDEMP PERAFLEAEA 
EADSEEEAYA AAVSELEELV YGDEGWLREG ALPVHEPGSD PMYRTDSEGG GEGGLVRVVV
GLERERVDAL LQELSSQPMP SSVPATLAPS LESAYGLYIE ALVCERRREL LDDSSCHAPG
EDEIRANLQR VADDIHIRTR FEGGVPLDRN RQPLRPLEVF VERVSGKTTR TPLPALPVSV
QQPEGEDALS YAVAVTDEHG LARFSFREGA RFSKGLRVSL DLGDPLGPLA ELWPDSEMVP
LGREVGLRRW AVIAEERVQG SEVGDKVFVQ SLDESMQAAG GVARVSLPSA VRGEIEKAGS
SALEAMLPAI AERLQGQVDV LVVAELDSEY ASRMGAYRVW YEARGRAKVY DMWTGALLAA
VEHTVTATGV GDERADREAR AKLGQQFAGS LAQVKAVEQP