Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0004 |
Symbol | |
ID | 8542374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4639 |
End bp | 7104 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646384792 |
Product | DNA gyrase, B subunit |
Protein accession | YP_003264539 |
Protein GI | 262193330 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACC CTACAGTCAC ACCAGCAAAC GACGCGACCG AATACGATGC TGACAGCATC ACGGTTCTCA AAGGTCTCGA AGCCGTGCGC AAGCGCCCGG GCATGTACAT CGGCGACACC GATGACGGCT CGGGCCTGCA CCACATGGTC CACGAGGTCG TGGACAACGC GGTAGACGAG GCCCTCGCCG GCTACTGCGA CCGCGTCGAC ATCACGATTC ACTCCGACAA CTCGATCACG GTCGAGGACA ACGGCCGCGG CATCCCGGTG GCCGTGCACA AGGACGAGGG TCGACCGGCG GCCGAGCTGG TCATGACCGT CCTGCACGCC GGCGGCAAGT TCAACCAGAA CTCGTACAAG GTCTCCGGTG GTCTGCACGG CGTCGGCGTC TCGGTGGTCA ACGCGCTGAG CCGGACGCTC AAGCTCGAGA TCCGGCGCGA GGGCAAGGTG TATTTCCAGG AGTACCGCCA GGGCATCCCG GTCAGCGACC TGCGCAGCAC CGGCACCACC GACCGCCGCG GCACCAAGAT CACCTTCCTG CCCGACCCCG AGGTCTTCAA GCAGACCGAG TTCTCGTTCG GCGCGCTGTC GCAGCGCTTC CGCGAGCTGT CGTATCTCAA CAGCGGCCTC ACCATCGCCA TCACCGACGA GCGCGAGAGC CAGCAGCAGG TGTTCTGCTA CGAGGGCGGC ATGGCCTCGT TCGTGGCCGA CCTCAACGCC AACAAGAACC CGGTCACCGA GGTGGTCGCG TTCACCGACG AGCGCGAGGG CGTCACGGTC GACATCGCGA TGCAGTGGAA CGACTCGTAC GCCGAGCAGA TCAACTGCTT CACCAACACC ATCAAGAACA AAGACGGCGG CACCCACCTC ACCGGCTTCC GCCAGGGTCT CACCCGCACG GTCAACGCCT ATGCGGCCGA GAACAAGCTG CTCAAAGAGC TCAAGGGCAA CAACCTCTCG GGCGAGGATC TGCGCGAGGG CCTGGTCGCC GTCATCTCGG TGAAGGTGGC CGACCCCAAG TTCTCCAACC AGCCCAAGGA CAAGCTGGTG TCGTCCGAGG TCGCGGGCGC GGTCGCGGCC GTGGTCAACG ACAAGCTGCA GAGCTTCTTC GAGCACAATC CCAAAGACGC GCGCTCGATC ATCCAGAAAG CCGTGGTCGC CGCTCGCGCC CGCGACGCCG CCCGCAAGGC GCGCGAGATG GTGCAGCGCA AAGGCGCGCT CGAGTACACC TCGCTGCCGG GCAAGCTGGC CGACTGCCAG GAGCGCGATC CCAGCAAGTG CGAGCTGTTC ATCGTCGAGG GTGAGTCCGC CGGTGGCTCG GCCAAGCAGG GCCGCGATCG CGAATTTCAG GCGATTCTGC CGCTCAAGGG CAAGATCCTC AACGTCGAGC GCGCGCGCAT GGACAAGATG CTGTCCTCGC AGGAGATCGT CACGCTGATC ACGGCGCTGG GCTGCGGCAT CGGCCCCGAG AAGGACATGG GCCGGCTGCG CTACCACCGC ATCGTCATCA TGACTGACGC CGATGTCGAC GGTTCGCACA TCCGCACCCT GCTCTTGACC TTCTTCTTCC GGCAGTACCC GGAGATCATC GAGAACAACC ACCTGTACAT CGCGCAGCCG CCGCTGTTCA AAGTGAAGCG CGGCAAGTCC GAGACCTACC TCAAGAACGA GCACTCGCTC GAGGACTACG TTCTCGACCT GGTGTCCAAA GAACTGGTCG TGCGCGGCAC TAGTGGCGAT GGCGCCGGCG GCGATGACGC CGGGCCCGAG ATCACGGGTG AGGCGCTGCA CGCCTTCATC AAGGACACCA ACGAGTACCG GCGCCACTAC ACGCAGCTCG ACAAGCGCGG TGACAGTCGC CTGTTCGCCT CGTTCATCGA GGGCGGCGAG TTCACCGAGC AAGACCTCGC CAGCGAAGAG GGCGTGGAGC GCGTCCGCGC CGGCATGCGC GCCTACCTCG AGGCCCACCA CAAGGACCTG GCCGACCTCG AGTTCGAGCT GGTGCGCGAC GAAGAGCACA GCGTGTACGC GCTGCGAGCG CCGCTCGAGG GCGGCAACGT CCGCCGCGAC ACCATCATCG GCCGCGACCT CTTGCAGACC CGCGAGGTCG AGGAGATCGC GCGCTTGACC AAGAGCCTCG ACGCCACGCT GCGCGGCCCC TACGTGCTGG TGCACAAGGG CGAGGACATC GGCACGGTGA CGACCCTCGA CGAGCTCGCC GAGGCGGTCG AAGCCGTCGG CCGTAAAGGA CTCTCGATCC AGCGCTACAA AGGTCTCGGC GAGATGAACT CCGACCAGCT CTGGGACACC ACCATGTGCC CGGATCAGCG CACCCTGCTC CAGGTGCGCA TCGACGCCCG CGAAGAAGCT GCCGACGTGT TCTCCGTGCT CATGGGAGAC CTCGTGGAAC CGCGCCGACA CTTCATCGAG AACAACGCGC TCAACGTCCG CAATCTCGAC ATCTGA
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Protein sequence | MADPTVTPAN DATEYDADSI TVLKGLEAVR KRPGMYIGDT DDGSGLHHMV HEVVDNAVDE ALAGYCDRVD ITIHSDNSIT VEDNGRGIPV AVHKDEGRPA AELVMTVLHA GGKFNQNSYK VSGGLHGVGV SVVNALSRTL KLEIRREGKV YFQEYRQGIP VSDLRSTGTT DRRGTKITFL PDPEVFKQTE FSFGALSQRF RELSYLNSGL TIAITDERES QQQVFCYEGG MASFVADLNA NKNPVTEVVA FTDEREGVTV DIAMQWNDSY AEQINCFTNT IKNKDGGTHL TGFRQGLTRT VNAYAAENKL LKELKGNNLS GEDLREGLVA VISVKVADPK FSNQPKDKLV SSEVAGAVAA VVNDKLQSFF EHNPKDARSI IQKAVVAARA RDAARKAREM VQRKGALEYT SLPGKLADCQ ERDPSKCELF IVEGESAGGS AKQGRDREFQ AILPLKGKIL NVERARMDKM LSSQEIVTLI TALGCGIGPE KDMGRLRYHR IVIMTDADVD GSHIRTLLLT FFFRQYPEII ENNHLYIAQP PLFKVKRGKS ETYLKNEHSL EDYVLDLVSK ELVVRGTSGD GAGGDDAGPE ITGEALHAFI KDTNEYRRHY TQLDKRGDSR LFASFIEGGE FTEQDLASEE GVERVRAGMR AYLEAHHKDL ADLEFELVRD EEHSVYALRA PLEGGNVRRD TIIGRDLLQT REVEEIARLT KSLDATLRGP YVLVHKGEDI GTVTTLDELA EAVEAVGRKG LSIQRYKGLG EMNSDQLWDT TMCPDQRTLL QVRIDAREEA ADVFSVLMGD LVEPRRHFIE NNALNVRNLD I
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