Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2382 |
Symbol | |
ID | 8535546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2548991 |
End bp | 2550502 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646384756 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_003264238 |
Protein GI | 261856955 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0552603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAATCTT TAACCATTTC GGAATGGTTG CTCACCGAGC TCAAACAAGG GCGATTTCCA CCACGGATGC CGTCACATCG ACGTGTCTAC GAAGCCATTC GTCGCGCCAT TGCCACGCAG CATCTCACGC CCGGCGCCCG ATTGCCGTCT ACACGCAGTC TGGCGGAAGA GCTCAGTCTG TCCCGAAACA CCCTGCTGGC CGCATTCGAG CAACTGCATG AAGAAGGTTA TGTCGTGTCA CGGATCGGTA GTGGTACGCG CGTTGCCGCC ACGTTACCGG AAAGCTTTGT CCCAATGCGG GCGTCCGGCG CAACAACAGA TGCCGAGCCG CCAATGAACA CGTCGGGAAG GAACACGTCG GGCCTGTCCA AACGAGGTGC CATCGTCGCC GGGCCATCGG ATCAACCCAG TTATGAGGTG CAACCTTTTA CGCCAGGTGA GGATGATTTC TCTGCTTTCC CGACCCAGAT CTGGCGTCGC CTGCTCAACC GCCAATGGCG CGATCCTCAG CCCGCCTTTC TGGACTACGG CCATGCCGGG GGCCATTTGC CGCTTCGGCA CGCCATTGCC AACTATCTGC GCATGTCCCG CACCGTCAAT TTGACGGTGG AACAGGTGCT GATCACCTCG GGCACACAGC AATCTATCGA CCTGTGTGCC CGCATGCTTA CCGATTACGG GGACCGCGTA TGGGTAGAAA ATCCCTGCTA CTGGGGCGCG CGACGCGTGC TTGAGGTCAA CGGCCTGTCA CTTCACCCGG TCCCTGTAGA TGATGAAGGA ATGGCACCAG GCAACACCGA TTTTCGAAAT CCACCGCGTC TGATCTACAC CACGCCATCC CACCAATACC CCAAGGGCGT TGCCATGAGT TATGGACGTC GCCGCCTGCT TCTGGATTAC GCTGCCAGCC GTGGGGCATG GATTCTCGAG GATGACTACG ACAGTGAATT CCGCTTCGAA GGGCGTCCGC TGTCCTCATT GCAAGGCATG GATCAGAGCG GCTGCGTGCT GTATATGGGT ACCTTTTCCA AGGTGATGTA TCCCGGCATC AAACTGGGCT ACATCGTGGT GCCGCCCGAA CTGGCAGAAC GCTTCAAACG CGGGCTGTAT GAACTGCAAC GCCCCGGTCA GGTCGTGATT CAGGCGGCGC TGGCCGACTT TATCGAAGAA GGTCATTTCT CAACCCATAT TCGTCGCTTG CGGCAAATAT ACAAGGAACG GCGCTACCTG CTGCAAAAGG CATTGGCACC CGTTACCAAC GTCGGCGCTC GCCTGCCGCC TGCCGGCTCC GGCCTGCACC TGGTGGTGGA ACTCCCCGCG GCGTGTGACG ATGTTCGAGT TGCCGAATTG GCCGCAGAAC AAGGCCTGCG CGTTTACCCG CTTTCCCATT ACAGCGTGGG AGAAAAGCGC GAAAAAGGGC TGATTATCGG CTATGCCTAT GCGTCCACGG ACCGCATCAC GACTTATGGC CGCATCCTTG CGGATGTGAT TCAGGCGGCC CTGAGCAACT AA
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Protein sequence | MESLTISEWL LTELKQGRFP PRMPSHRRVY EAIRRAIATQ HLTPGARLPS TRSLAEELSL SRNTLLAAFE QLHEEGYVVS RIGSGTRVAA TLPESFVPMR ASGATTDAEP PMNTSGRNTS GLSKRGAIVA GPSDQPSYEV QPFTPGEDDF SAFPTQIWRR LLNRQWRDPQ PAFLDYGHAG GHLPLRHAIA NYLRMSRTVN LTVEQVLITS GTQQSIDLCA RMLTDYGDRV WVENPCYWGA RRVLEVNGLS LHPVPVDDEG MAPGNTDFRN PPRLIYTTPS HQYPKGVAMS YGRRRLLLDY AASRGAWILE DDYDSEFRFE GRPLSSLQGM DQSGCVLYMG TFSKVMYPGI KLGYIVVPPE LAERFKRGLY ELQRPGQVVI QAALADFIEE GHFSTHIRRL RQIYKERRYL LQKALAPVTN VGARLPPAGS GLHLVVELPA ACDDVRVAEL AAEQGLRVYP LSHYSVGEKR EKGLIIGYAY ASTDRITTYG RILADVIQAA LSN
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