Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2376 |
Symbol | |
ID | 8535540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2542627 |
End bp | 2543739 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646384750 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_003264232 |
Protein GI | 261856949 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0669112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCGG TAACGGCCAC GACAGATCAG GATGTCTTAT TGAAAATTGA TGGCGTCAGC AAGGTCTTCG ACGGTGTCGT AAAGGCGGTT GATAATGTTT CTCTGACGGT GCCCAAAGGC AAGATTTTTG CCCTTGTCGG CAGTTCGGGC TGCGGCAAAT CAACCTTGCT CAGGATGCTG GCCGGGTTCG AAACACCGAC GAGCGGCCGA ATTTATCTCT CCGGACAAGA CATTACCGAC CTATCCCCAT ATGAACGGCC GGTCAACATG ATGTTTCAGT CCTATGCGCT TTTCCCCCAT CTGAGCGTTT GGGACAACGT GGCATTCGGC CTGCGGCGCG ATGGACTCAA GGGCGCGGAG CTCAACGAGC GCGTCAATGC CATGCTCAAT CTCGTTCAGC TGTCCAAGTA CGGTAAGCGC AAACCCCATC AATTGTCTGG CGGCCAGCAA CAGCGGGTCG CCCTGGCGCG CAGTCTGGCC AAGCGGCCCA CCCTCCTGCT GCTTGACGAA CCACTCGGTG CGCTTGACAA GAAGCTGCGG GAAACCACGC AGTTCGAATT GGTCAACATT ATCGAACAGG TAGGGGTTAC CTGTGTTCTG GTGACGCATG ATCAGGAAGA AGCGATGACC ATGGCCTGCA GCATCGCGGT CATGGATGAG GGAACACTGC TTCAGGTGGG CACACCGGAC GAGATTTACG AAACCCCCAA CAGCCGATTC GTGGCAGGCT TTATTGGCAA TGTGAATATC TTCGAGGGCA AGGTCGACGA AGACGAGCCC GATCACGTCA CCGTGCGCTG CCCGGAGTGT ACGCACTATG TGGGCCATGG CATATCCGGG ACATCGGGCA TGGACGTCGC CGGCGCCCTT CGCCCGGAGA AAATCCAGCT CTCCAAGGAA AAGCCAGAGG CCAAATACAA CTGGTGTGAA GGCGAGGTGG TCGAAATGGC TTATTTCGGT GCGCACACAA CGTATCACCT CAAGTTGGCC AGTGGCATGA TCCTAAAGGC CCAAGAAATA AACATTACCC GGGATTTGAG TTGTGGCCTG ACTTGGGGTG ATCGTGCATA TGCCCAGTGG GACAATCTGG CCATGGTTGT ACTGACGGAA TAA
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Protein sequence | MASVTATTDQ DVLLKIDGVS KVFDGVVKAV DNVSLTVPKG KIFALVGSSG CGKSTLLRML AGFETPTSGR IYLSGQDITD LSPYERPVNM MFQSYALFPH LSVWDNVAFG LRRDGLKGAE LNERVNAMLN LVQLSKYGKR KPHQLSGGQQ QRVALARSLA KRPTLLLLDE PLGALDKKLR ETTQFELVNI IEQVGVTCVL VTHDQEEAMT MACSIAVMDE GTLLQVGTPD EIYETPNSRF VAGFIGNVNI FEGKVDEDEP DHVTVRCPEC THYVGHGISG TSGMDVAGAL RPEKIQLSKE KPEAKYNWCE GEVVEMAYFG AHTTYHLKLA SGMILKAQEI NITRDLSCGL TWGDRAYAQW DNLAMVVLTE
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