| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2362 |
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| Symbol | |
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| ID | 8535526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2527103 |
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| End bp | 2528890 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646384736 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_003264218 |
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| Protein GI | 261856935 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAA CCATGACCTT GGGTAGGACG ATGGAAAAGA AAACATTCGA TGCGGTAATC
ATCGGTGGCG GCGGCGCGGG CCTGCGCGCG GCCTTGCAGC TTGCCGAATC GGGGATCAAG
GTAGCCGTGG TCTCCAAAGT GTATCCCACC CGCTCGCATA CGGTTTCGGC CCAGGGCGGC
ATTGCCGCCA GTCTCGGCAA TGTGAGTGCG GATAACTGGC ACTGGCACAT GTACGACACG
GTCAAGGGTT CGGATTATCT GGGCGATCAG GACGCTATCG AATTCATGTG TCGTAACGCA
AACGAAGCGG TGATTGAGCT GGAGCATTAC GGCATGCCGT TCGACCGCCT AGATAACGGC
AAGATCTATC AGCGCCCGTT CGGTGGCATG ACTCAAGAGT ACGGTGGCGC ACCTGCTGTG
CGAACCTGCT CGGTGGCCGA TCGCACCGGG CATGCCATGC TCCATACGTT GTATCAGCGC
AATATCGCCG CCCGTACCCA TTTTTTTGAA GAATACTTCG CAATTGATCT CGTTATGGAC
GAACAGGGTC ACGCCTTGGG CGTGGTGGCT TTGGGCATCG AATCCGGAGA ACCAGTGTTC
ATCGAGGCGC GCGCCACCCT GCTCGCGACC GGCGGTGCGG GACGGATTTT CTCGGCCACC
ACCAATGCCT TGATCAATAC GGGCGATGGC CTCGGGATGG CACTGCGCGC AGGCATCCCG
CTGGAAGACA TGGAGTTCTG GCAATTTCAC CCCACCGGGA TTCATGGTGC GGGCGTGCTG
GTGACCGAAG GGGTGCGCGG CGAAGGCGGT TATCTGGTGA ACAAGCACGG CGAGCGCTTT
ATGGAGCGTT ACGCGCCCAA TGCCAAGGAT CTGGCCAGCC GGGATGTTGT TTCCCGCGCC
ATGGCGGTAG AGATTTTCGA AGGTCGAGGC TGCGGCGAAC AGGGCGACCA CGTGCTGCTC
AAGCTCGACC ACCTCGGACC TGATGTCATT CATCAGCGTC TGCCGGGAAT CAGTGAGCTG
GCGAAAAAAT TCGCCCATGT CGATCCGGCC AAAGATCCGA TTCCCGTCGT ACCCACCGTG
CATTACATGA TGGGCGGCAT TCCGACCGAC CTGCATGGTC GCGTGGTGAA GCCAGCGGCT
GACGGCACGC AGGCTGCGGT TCCCGGCCTC TACGCCATCG GCGAATGCGC CTGCGTATCG
GTGCATGGTG CCAATCGTCT GGGCAGTAAT TCCCTGCTGG ATCTGATCGT GTTCGGTCGG
GCCGCCGGTA ACGATGTGAT TGCGTACTGC CGTGAAAACC CATCGGCACG TGCTGTTCCG
TCGGCTTCCT TGGAACGCAT CTCGGCGCGG ATGGCGCGTT GGGAGCGAAA GGGCGAAGGC
CCCACCGTGG CGCAGTTGCG CGAAGAAATG CGCACGACGA TGCAGCAGCA TTGCGGCGTG
TTCCGAACAG AAGCCGTCTT GCAGGATGGT GTCCGAAAAA TGCAGGAAAT TGCCGCAAAA
TTGCCCGATG TGGTGCTGCG CGATCACAGC AAGGTATTCA ACACGGGGCG CATTGAGGCG
CTGGAGCTTG AAAACCTGAT GGCGGTAGCG CTGGCCACGA TGATCTCGGC GGCCGCGCGC
AAGGAGAGCC GCGGCGCGCA TGCCCGCGAC GATTTCCCCG AACGCAACGA CGCCGAATGG
ATGAAGCACT CGCTCTATTT CGCCGCCGAC CAACGTCTCG ATTACAAGCC GGTACGCCAG
CAGCCACTGA CCGTGGATGC CTTCCAACCT AAGCCACGCG TTTACTAG
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| Protein sequence | MNTTMTLGRT MEKKTFDAVI IGGGGAGLRA ALQLAESGIK VAVVSKVYPT RSHTVSAQGG
IAASLGNVSA DNWHWHMYDT VKGSDYLGDQ DAIEFMCRNA NEAVIELEHY GMPFDRLDNG
KIYQRPFGGM TQEYGGAPAV RTCSVADRTG HAMLHTLYQR NIAARTHFFE EYFAIDLVMD
EQGHALGVVA LGIESGEPVF IEARATLLAT GGAGRIFSAT TNALINTGDG LGMALRAGIP
LEDMEFWQFH PTGIHGAGVL VTEGVRGEGG YLVNKHGERF MERYAPNAKD LASRDVVSRA
MAVEIFEGRG CGEQGDHVLL KLDHLGPDVI HQRLPGISEL AKKFAHVDPA KDPIPVVPTV
HYMMGGIPTD LHGRVVKPAA DGTQAAVPGL YAIGECACVS VHGANRLGSN SLLDLIVFGR
AAGNDVIAYC RENPSARAVP SASLERISAR MARWERKGEG PTVAQLREEM RTTMQQHCGV
FRTEAVLQDG VRKMQEIAAK LPDVVLRDHS KVFNTGRIEA LELENLMAVA LATMISAAAR
KESRGAHARD DFPERNDAEW MKHSLYFAAD QRLDYKPVRQ QPLTVDAFQP KPRVY
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