Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2336 |
Symbol | |
ID | 8535500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2505629 |
End bp | 2506282 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646384711 |
Product | methyltransferase GidB |
Protein accession | YP_003264193 |
Protein GI | 261856910 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000208151 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCATGA ACGATAGGGT CATGCGCTAT GCCGAGCACA TCGAGCAGGG CGTACAGGCG ATGGGGCAAG ATATAGCCCT TCGCAGTGCG CAGCGTATCT CGGCTTATAT CCATTTGCTG GCCAAGTGGA ATCGAACCTA CAACCTGACA GCCGTGCGTA ACCTTGAAGA CATGCGTGTG CGTCATGTAC TGGATGCATT GGCCGTGCGC CCGTGGATAA GGTCGGCAGG ACATTTGGTC GATGTTGGTA GCGGCCCCGG TATTCCGGGT ATCCTGCTGG CGCTGGCCGA TGAATCCTTG GCCGTAACGC TTATTGACTC AAACTTGAAA ATGACCCGAT TCGCTGAAGC GGCCGTGCGT GAGCTGGCAA TCGAAAATGT AACCGTGCTG CGTTCACGGG TCGAGGAAGT ACCCGCTTCA TCGTTCGATC AAGCCATATC GCGTGCGTTC GCATCCACGG CAGATTTTTT GCGCCTGACC TGTCATCTCG TGCGTCCCGG CGGCGAGTGG CTTGCGATGA AAGGGCGTCT TGATGAGCGC GAGCAGCAAG CCGTTGCGGA TGGTTTTATC TGTCGGGAAA CCATCCCGCT GTCTGTTCCC TCGCTGGATG CGGCGCGTCA TTTACTGATC TATCAACGAG AGGCGCAATT ATGA
|
Protein sequence | MVMNDRVMRY AEHIEQGVQA MGQDIALRSA QRISAYIHLL AKWNRTYNLT AVRNLEDMRV RHVLDALAVR PWIRSAGHLV DVGSGPGIPG ILLALADESL AVTLIDSNLK MTRFAEAAVR ELAIENVTVL RSRVEEVPAS SFDQAISRAF ASTADFLRLT CHLVRPGGEW LAMKGRLDER EQQAVADGFI CRETIPLSVP SLDAARHLLI YQREAQL
|
| |