Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2122 |
Symbol | |
ID | 8535281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2277583 |
End bp | 2278851 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646384499 |
Product | Three-deoxy-D-manno-octulosonic-acid transferase domain protein |
Protein accession | YP_003263986 |
Protein GI | 261856703 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTGT GGGTATATCG CCTCGCACTG GGCCTCGCGT TGCCGTGGCT GCTTGTCGAT GCCTTACGGC GGTACTTTCG CGCTCCCCAA ACGCACCGGC TGCTCTGGGC GCAATTCGGG CGGATTCCCG ATAACCTGCC AACAGGAAGT GTTTGGCTGC ATGCGGTATC GCTGGGGGAG GTCCGGGCTG CGGCACCATT GATTCGCGCA CTGCAATCGC GGTGGCCTAG CGTGCCTTTG GTGGTGAGCA CCATGACGGA AACCGGTGCG CAAGCGGCGC GGGAATTGGG TGTGCGGCAT TTCTATGCTC CGTTTGATTA TGCCTTCGCG CAACGTGCCG TTATCAGGCG GTTGCGGCCT AAGTTGATTG TCGTAATGGA AACAGAATTG TGGCCCAATT GGGCGCAGGT GGCCGAGGCG CACGGCGTGC CGATGGCGGT GGTTAATGCG CGTTTGTCGG ATCGTTCATT CCGGCGGTAT CGCCGCTGGG GTGGTGCCTT GCTCAAGCAG ACGCTGAACC GTATCGGCCT GATTTGCACC CAATCGCAAG ATGATCAGGT GCGATTTCGC GCTCTGGCGC CCGCAGCGAT GCACGAGCGC ATTATCGATT GCGGCAATAT AAAATTTGAT GTGGCTCAGC CTGAGGTCAA TCTATGGTCT GCCGGTGCCC GAACCGTATG GCTGGCGGCG AGTACCCACG ATGGTGAAGA GTCAGTAGTC CTGGATGCAC ATCAACAGAT TCTTGAGCAG CATCCCGATG CGTTGCTCGT TCTGGCGCCG AGGCACCCTG AGCGGGCACA AACAGTGCAG TCGTTGATAT CCAGCCGAGG GTTGGTCATG CAGCGCTCGT CGATGGGGCT AACGGTCGAT ACAAAAACCC AGGTGCTGCT TGTCGACCAG ACCGGATTGC TCATGCAATT TTTTGCCGCA ATCGAAGTGA TATTCATGGG TGGATCGCTT GTCATGACGG GCGGGCATAA TCCCATCGAA CCGGCCGTGT TCGGCCGTGC AGTACTTAGC GGGCCGAATG TGCATAATTT CCGGGCGGTA TACCGATTGC TGCGAGAGCG AGATGCCGTG CGTATGGTGA AAGATGAAGC GGACGTGGTC GCCGCCCTAG AGGCTGCCCT GGAAGCTGTA TGGGCGCAAC CGGAAGCATG GCGACAAGCC GGAGTTCGTG CCCATGCTGT CGTGCAAGCC AATCGAGGGT CGACGGCGCG TGTCGTCGAT GCCTTGGATC GTATTTATCG AGGAGTTGAG CGTGTTTGA
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Protein sequence | MSLWVYRLAL GLALPWLLVD ALRRYFRAPQ THRLLWAQFG RIPDNLPTGS VWLHAVSLGE VRAAAPLIRA LQSRWPSVPL VVSTMTETGA QAARELGVRH FYAPFDYAFA QRAVIRRLRP KLIVVMETEL WPNWAQVAEA HGVPMAVVNA RLSDRSFRRY RRWGGALLKQ TLNRIGLICT QSQDDQVRFR ALAPAAMHER IIDCGNIKFD VAQPEVNLWS AGARTVWLAA STHDGEESVV LDAHQQILEQ HPDALLVLAP RHPERAQTVQ SLISSRGLVM QRSSMGLTVD TKTQVLLVDQ TGLLMQFFAA IEVIFMGGSL VMTGGHNPIE PAVFGRAVLS GPNVHNFRAV YRLLRERDAV RMVKDEADVV AALEAALEAV WAQPEAWRQA GVRAHAVVQA NRGSTARVVD ALDRIYRGVE RV
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