Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2088 |
Symbol | |
ID | 8535247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2235405 |
End bp | 2236559 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646384466 |
Product | DNA protecting protein DprA |
Protein accession | YP_003263953 |
Protein GI | 261856670 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.972888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGACCT CTGAGCACCA AACAACGCCC GACGCCGATG CGCGCCGGGC GTTGCTGTTT CTGATCACCA TCAATGGGAT GGGGCCGAAA CGTCTGCGCT GCCTTCTGGA TGCATTCGAC ACACCGCAGG CAGCCCTAGC GGCACCGGCA TCGGAATGGA TTCGCTTGGG CCTTCCGGCC TCTCTGGCAA ATCAACACCC GCGCGGCATG GCTGATCGTG TCGAAACGAT GCTGTCCTGG CTCGATGAAT CGGAACAACA CCATTTGGTC CTTGCTGGAG AAAAATCTTA CCCACCGCAA CTTGCCGACC TTCCTGACGC ACCCGCTGCA CTCTTCGGCA AAGGCGATAT CCGACTACTG GGCGAGCCAC AACTGGCTAT CGTCGGTGCC CGCACGCCGA CGAGCGGCGG GATTAACAAT GCACGCGCCT TTGCCCGATA TCTCTCCGCG CAGGGCCTCG TCATCACGAG CGGACTGGCG CTGGGAATCG ATGCTGCAGC TCATCGCGGG GCGCTGGCCG CTCACGGCGC CAGCGTTGCC GTCATGGGAA CCGGGCCGGA TATCATCTAC CCGCGCGAGC ACCAGGCACT CGCCGCCGAG ATCGTAGCGC AAGGCGGTTT GCTCATCAGC GAATGGCCTC CCGGCACCAC GGCAAGGAAG GAACATTTTC CGCGCCGGAA CCGATTGATC AGCGGCCTGT CGGAAGGCGT ACTGATTGTG GAAGCCAGCC TAAAGAGCGG TTCACTCATT ACCGCCCGCC TTGCCGCCGA ACAGGGGCGG GAGGTCTTTG CCATTCCCGG ATCAATTCAC AACCCCTTGA GTCGCGGCCC GCACCGACTC ATTCGGGAAG GCGCCAAGCT GGTCGAAACC GCTCAAGACA TTTTCGAAGA ACTCATCGAC AACCTCGGTG CACGCCTGCG TCAAACCGAC GACACCTCCC TGTTCGAACC GGAGTCTTCA CCCGCTCTTG CGGCTCACCT CGACCCGGAA CAACAGAAAA TTCTGGACTG TCTCGGCTTC GATCCTCAGT CTGCTGATAC GCTTATTGCA TCCAGCGGAT TGACCCCTGC CGAAGTTTCC TCCATCCTCC TCATGCTTGA ACTTGCTGGA CACGTCACCA CCTTACCCGG AGGATTGTAT GTGAGAACGG CCTGA
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Protein sequence | MLTSEHQTTP DADARRALLF LITINGMGPK RLRCLLDAFD TPQAALAAPA SEWIRLGLPA SLANQHPRGM ADRVETMLSW LDESEQHHLV LAGEKSYPPQ LADLPDAPAA LFGKGDIRLL GEPQLAIVGA RTPTSGGINN ARAFARYLSA QGLVITSGLA LGIDAAAHRG ALAAHGASVA VMGTGPDIIY PREHQALAAE IVAQGGLLIS EWPPGTTARK EHFPRRNRLI SGLSEGVLIV EASLKSGSLI TARLAAEQGR EVFAIPGSIH NPLSRGPHRL IREGAKLVET AQDIFEELID NLGARLRQTD DTSLFEPESS PALAAHLDPE QQKILDCLGF DPQSADTLIA SSGLTPAEVS SILLMLELAG HVTTLPGGLY VRTA
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