Gene Hneap_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2081 
Symbol 
ID8535240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2227852 
End bp2230302 
Gene Length2451 bp 
Protein Length816 aa 
Translation table11 
GC content56% 
IMG OID646384459 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003263946 
Protein GI261856663 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTCG TCGGCAGCTG GGGCCAGATC TACACGCGTT GGATTCGCCG ACTGATCCCA 
CCGATCAGCA TGATGGTCGT CGTGCTGCTG TTGATTCTGA TGTATCTGAT TTCAGAATCA
CTTCAGCGGG CAAACCAACC GGAGCATCTC TATCTTTCCC TGTTGGGACT GTCTGCGCTG
GGGATTTTGT TCCTGGCGGC GGTGGTGCTC GGGCATATCA TCCGGTTGGT CAGCCATTAT
CGGCGCGGTG CGCCCGGTGC TCGGCTGACG GCGCGATTGG TGCTCACGTT TGTCGGTCTG
ACTTCGATCC CCGTGCTTAT CGTGTTTTAT TTCTCCGTGT CGTTCATCCA ACGCGGGATC
GATTCCTGGT TCGACGTGCA GGTCGAGCAG GCGATGTCGG ATGCGCTTTC GTTGTCGCAA
TTGGCGTTTG ATGGACAGAT GCGCACGGCC ATGAATGAAA CCATGCGCGC AGCCAAGCAA
CTTAAAGGCG TATCGGGTGA TCTGGTTGCA CTGGATTTGA ATGCGGTGCG CCGCAATACC
GGTGCCCACG AGATGACGAT TTTCGGTTCA CGGAACCTGA TTGTGGCATC CGCTTCCGAT
GATTTGCAGG CGATCGTGCC TTCCCGTCCG GACGAAACGG CACTGAGCCA TGCGCGCGCA
GGGAAGGACT TCATCGGTCT TGATCCTGGG GGCGGAGACT CCATGCGCAT CCGGGTTGTT
GTCCCGCTGA CCGCAGGGCT GACCGGTGAT GGCAGTAGTG AAGTCCTGCA GGCGCTGTAT
TCCATTTCGC CTCGAGCAAA CCAGCTTTCG AGTAGCGTGC AGGCTGCCTT CAATGAATAC
CGCTCGTTGA TTTTTCTGCA CAAATCACTG AAAAAGACCT TTACCTTTGC GCTTACCTTG
GCGCTGCTGT TGTCCCTTTT GACTGCGGTA TGGCTTGCCT TTATCGCTGC GCGGAGGTTG
TTGGCGCCGA TCCGTGAACT GGCGGCCGGT ACGCGCGCAG TGGCCGAGGG TGACTATAGC
CTGCGTTTAC CCGTGGATCG TCGTGATGAT CTGGGTCAAC TGGTGCAGTC GTTCAATACA
ATGACGGCAC GGGTGCGCCG CGCTCATCAG GTGATGCAGC AACTTCAGGA AGTGGCGGAC
CAGGAGCGCG ATTATCTTGA AACAGTGATT CAACACCTTT CATCCGGCGT GTTGACCCTG
TCGCCCGATG GCCGCATTAC ACGAAACAAT TCCGTCGTCA CACAACTTTT AAGCATTACC
AGTCAGCATA TTGATGGGTG CACTCTGACC GAGATCTGTC AGATATATCC CCATCTGGAG
CCGATCTGTG CTGCTTTCGG TCATCTTCTG GAGCCCGGTC AATTGCCGGC TGGTGCCACT
GTTGAGGCTC AAGTCCGCAT TATGGGCGAC GCCGGGCGAC GCATCCTGTT GAGTCGGGTT
GCCGCACTGC CCGCCGATGA TGTGACCGGT GGTTTCGTTC TGGTTTTTGA AGATGTGACC
ACCTTGATTC AGGCTCAGCG CGATGCGGCC TGGTCCGAGG TGGCGCGTCG GTTGGCGCAT
GAAATCAAGA ACCCGCTTAC GCCCATTCAG TTGTCGGCGG AGCGGTTGCG TCGTCGGTTG
TTGGGTAATC TCAGCGATGA GCCTGCCCAG ATTCTGGATC GCTCGACCCA AACCATCATC
AATCAGGTCG AGGCAATGAA GTTCATGGTG AATGAATTTG CCGAATATGC GCGTTCGCCG
CAAATCACCC TAAAAATTCT GGATCTGGAT GAGTTGGTCT CGGAGGTTAT CGATTTGTAC
AAAGGCGGCG ACATCCCCGT ACTGCATCGA TCCGCCGGGC ATCCGCTGCC GGTGCGTGCC
GATGCAGGAC GCATCCGGCA GGTGTTGCAC AACCTGATCC GCAATGCGCA ACAGGCAATG
ACCGAGCAAG GCTGTCCCGG GTCCGATGAG CCCGAGGTGA CGCTATCGAC CGGCTTGCAT
CAGGAAGGCG GTTTGGTTCT GGTTGAGTTG ACCGTGACCG ATAATGGCAC GGGATTCCCG
GAAGATATGA TTGATCGCCT GTTTGAGCCG TACACCACGA CACGACCCAA GGGATCGGGA
CTGGGTTTGG CGATCGTGAA GAAAATCGTG GAAGAGCATA GCGGTATGGT GCTGGCTTCC
AATGTGCAGG ATGGACCTGT CGAATTGCAA GGTGATATCC CAGCGCGGGG TATGGCCACT
GCGAAAACAG GCGCGCGCAT TGTGATTCGG TTACCCTTTG CACTTCCCGA CCTACCGATG
GATACGAACA GGGAGACGGC ATCGCCCAAA TCATCGGTCT TGACGGGGTC GAAGGAAGAT
CGTCCCGAAA CGTCTCCCGC TGATTCGACA AGTAGGCATA ATGCCCCAAG GGACTTGTTC
CGCCGGATGG ATGACACCCG TGCGGAATCC GATTTAGATC ATTCAGGATA A
 
Protein sequence
MKFVGSWGQI YTRWIRRLIP PISMMVVVLL LILMYLISES LQRANQPEHL YLSLLGLSAL 
GILFLAAVVL GHIIRLVSHY RRGAPGARLT ARLVLTFVGL TSIPVLIVFY FSVSFIQRGI
DSWFDVQVEQ AMSDALSLSQ LAFDGQMRTA MNETMRAAKQ LKGVSGDLVA LDLNAVRRNT
GAHEMTIFGS RNLIVASASD DLQAIVPSRP DETALSHARA GKDFIGLDPG GGDSMRIRVV
VPLTAGLTGD GSSEVLQALY SISPRANQLS SSVQAAFNEY RSLIFLHKSL KKTFTFALTL
ALLLSLLTAV WLAFIAARRL LAPIRELAAG TRAVAEGDYS LRLPVDRRDD LGQLVQSFNT
MTARVRRAHQ VMQQLQEVAD QERDYLETVI QHLSSGVLTL SPDGRITRNN SVVTQLLSIT
SQHIDGCTLT EICQIYPHLE PICAAFGHLL EPGQLPAGAT VEAQVRIMGD AGRRILLSRV
AALPADDVTG GFVLVFEDVT TLIQAQRDAA WSEVARRLAH EIKNPLTPIQ LSAERLRRRL
LGNLSDEPAQ ILDRSTQTII NQVEAMKFMV NEFAEYARSP QITLKILDLD ELVSEVIDLY
KGGDIPVLHR SAGHPLPVRA DAGRIRQVLH NLIRNAQQAM TEQGCPGSDE PEVTLSTGLH
QEGGLVLVEL TVTDNGTGFP EDMIDRLFEP YTTTRPKGSG LGLAIVKKIV EEHSGMVLAS
NVQDGPVELQ GDIPARGMAT AKTGARIVIR LPFALPDLPM DTNRETASPK SSVLTGSKED
RPETSPADST SRHNAPRDLF RRMDDTRAES DLDHSG