Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2016 |
Symbol | |
ID | 8535175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2162040 |
End bp | 2163260 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646384398 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_003263885 |
Protein GI | 261856602 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.301828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA ATTCCTCGAA TCCTTGGGAT CGGCGGAAGT TTCTGGGGGC CGTGCTGGGC TCCAGTTCCG CTGTTTTTGG CTTGGTCGCC CCGGATAAAG TGCTTGCTGC CCGGTTGATC AATACCGCGA CAAACTACCG GCACGCGGAT TACACGCGTT ATGTTTTCGG CGTGAATGGG CCGTTGGATT ATAAATCCTT CACATTGGAT AACCCGTCGC GGCTTGTTGT GGACTTGACG CAGACCGAGA TGAATCGAGT CAATATTCCT CCTGCGCCTG CTGGCTCGAT TGTCAGCGAC GTGCGTGTCG GGGTTCGCGA TGGCTATAAC CTGCGCATCG TCTTTGATCT CAAGGCGCCG GTAAATCCCC GTCTTATTCT GCTCCCGCCG GGGGATGGTC AGGGGTATCG ACTGGTGGTC GATCTGCCGC ATGACAAGGC GACCACGCTC GTCGCCCGTG ATGTGGCCGA TCCGGATAGC AAGCCGAAAA TCCAGACCCA AAGTACGTTC CGCGACCTCG TGATCGCCAT TGATCCGGGG CATGGCGGCA AGGATCCGGG TGCGATCGGT CATCGGGGCA CCAAGGAAAA GCATATTGCG CTGGATATCG GCCGACGCCT GCGGGATATG GTGGCCGCTA CACCTGGCTT GAAGCCGGTG ATGACGCGCG ATTCGGATAA ATTCATCCAT CTACGCGGAC GGACGGCCAT TGCGCGCAAC GCCAAGGCCG ATCTGTTTAT TTCCGTGCAT TCGGATGCGT TTCGGGTCAC CTCGGCGCGG GGCGCGTCGG TATTCTGTTT GAGTCAACAC GGGGCGACTT CCGAAGCGGC GCGCTGGATG GCGAATCGTG AAAACGAGGC CGACTTCGTG GGCGGCGCTT CCATTTCCGA TCACGATCAG GATGTGGCTT CCGTATTGTT GGATCTTTCG CAGACCAAAA CGCTGGAGAA CAGTCTCGAT TTTGGCCATC GGGTATTGGG CCAGATTGGC GATATTACCG ATCTGCATTC CCGCCGTGTG CAGCAGGCCG GTTTTGTTGT GCTCAAATCG CCCGACATCC CTTCGATCCT TGTTGAAAGT GCCTTTATCA GCAATCCACA GGAAGAAGCG CGTCTGAGAA CGGCGGCTTA CCAGAAAGAG ATTGCGCGCT CGATTCTTGA CGGCATCAAT ACCTACTATG CCGAGCGTGC GCCCGAAGGC ACGCGCTACG CCATGCTCTA G
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Protein sequence | MFDNSSNPWD RRKFLGAVLG SSSAVFGLVA PDKVLAARLI NTATNYRHAD YTRYVFGVNG PLDYKSFTLD NPSRLVVDLT QTEMNRVNIP PAPAGSIVSD VRVGVRDGYN LRIVFDLKAP VNPRLILLPP GDGQGYRLVV DLPHDKATTL VARDVADPDS KPKIQTQSTF RDLVIAIDPG HGGKDPGAIG HRGTKEKHIA LDIGRRLRDM VAATPGLKPV MTRDSDKFIH LRGRTAIARN AKADLFISVH SDAFRVTSAR GASVFCLSQH GATSEAARWM ANRENEADFV GGASISDHDQ DVASVLLDLS QTKTLENSLD FGHRVLGQIG DITDLHSRRV QQAGFVVLKS PDIPSILVES AFISNPQEEA RLRTAAYQKE IARSILDGIN TYYAERAPEG TRYAML
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