Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2002 |
Symbol | |
ID | 8535161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2147888 |
End bp | 2149768 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646384384 |
Product | Heat shock protein Hsp90-like protein |
Protein accession | YP_003263871 |
Protein GI | 261856588 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000463529 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGC CAGAAACCCG GGGTTTCCAA ACGGAAGTTA AAGAGCTGTT GCAGCTCATG ATCCACTCCC TGTATTCCAA TCCCGAGATA TTCCTGCGGG AATTGGTATC CAATGCCTCT GATGCTTGCG ACAAGTTGCG TTTCGAGGCC GTGTCCGACG ATGCGTTGTA CGAGGGTGAT GAGTCATTGC GTATTCGGGT GAGCTTCGAT GAAGCCGCCA AGACCGTCAC GATCGAGGAT AACGGCATCG GGATGAACCG CGATGAAGTA ATCGAGAATA TCGGCACCAT CGCGCGTTCC GGTACGAAGG CCTTCATCCA GAAGCTGGGG CAGGACAAAT CGAAAGACCT GTCGCAGATC GGTCAGTTTG GTGTGGGTTT CTACTCTGCA TTTATTGTCG CCGATGAAGT CAGCCTGACG ACGCGCCGAG CAGGCATGGG TCCGGAGCAT GGCGTGAAGT GGACTTCCCG TGGCGAAGGC GAATATACGC TGGAAACGGT CGATAAGCCT GAACGCGGGA CCACCATCGT CTTGCATCTG CGTGACGATC ACACCGACTT CGCCAATGAC TGGCGACTGC GTTCTACCAT CCGCAAATAT TCCGATCACA TCACCTTCCC GGTTGAGATG CTGAAAGTCC CTGCGCCGAA GGCCGATGAT GCAGAAGAGA AAACGGAAGA AACAGCGGAA TGGGAGCGTA TCAACGATGC GCAGGCATTG TGGGTGCGTC CGAAATCGGA AATTACCGAT GACGAGTACA CCGAGTTTTA CAAGCATGTG GGGCACGACT GGGAGGCCCC GCTGGCCTGG ACGCACAACC GAGTCGAAGG CAAGACTGAA TATACTTCCT TGCTCTACAT CCCCGCGCGT GCGCCGTTCG ATCTCTGGGA TCGCGAGTCC AAGCAGGGCG TCAAGCTTTA TGTGAAGCGG GTCTTCATCA TGGATGACGC CGAAAAACTG ATGCCTCGTT ATCTGCGCTT TGTGCGCGGT GTGATTGATT CGGCTGACTT GCCTTTGAAC GTATCGCGTG AAATCCTCCA GTCCAACCGG GTGCTGGACA CGATTCGTCA GGGTTCGGTC AAGCGCGTGT TGGGTATGCT CGATCAGATG GCGTCCAACG ATGCGGAGAA ATACGCCAAA TTCTGGGGCA CCTTCGGTCA GGTTCTGAAA GAAGGTGTGG GTGAGGACTT CGGCAACCGC GAGCAGATCG CCGGGTTGTT GCGATTTGCC TCCACGCAGG CGGGATCGGA TGAGCAGAAC GTCAGCCTCA AAGAGGTCAT CGGGCGCATG CAGGAAGGCC AGGATGAGAT TTACTACATC ATCGCCGACT CTTATGCTGC GGCGCTTGCC TCTCCGCATC TGGAAATCTT CCGCAAGAAA GGCATTGAAG TGCTGCTGTT GTGGGATCGC ATTGATGAAT GGCTGATGTC GCAACTCACA GAGTTCGACG GCAAGAAATT CAAATCCGTG ACGCGCGCCG AACTGAGCCT TGACGAGGCA GCCGAAGACG AACCGGAAGC CAAGGAAACT CAGGACGCGT TGGTTGAGCG TCTCAAGAAA ACTCTGGGTG ACCAAGTCGA TGATGTGCGG ATATCCAAAC GTCTGGTCGA CTCTCCCGCC TGTCTGGTGA CCACGGAAGA AGAAATGAGC CTGCATCTTC AACGCTTGCT CAAAGAAGCG GGTCAGGCGG CGCCGACCGT GAAGCCCATT TTGGAGATCA ATCCGCAGCA TCAACTGCTG CAGCGGGCGG CGAACGAAAC GGACGATGCG CGTTTTGAAG ACATTGCCCG CGTTCTATTG GGACAGGCGG CGTTGGCGGA AGGCGGGCAT TTGAGCGATG CTGCCGATTT CGTAACACGG TTGAATCGCT TGTTGGTCTG A
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Protein sequence | MSQPETRGFQ TEVKELLQLM IHSLYSNPEI FLRELVSNAS DACDKLRFEA VSDDALYEGD ESLRIRVSFD EAAKTVTIED NGIGMNRDEV IENIGTIARS GTKAFIQKLG QDKSKDLSQI GQFGVGFYSA FIVADEVSLT TRRAGMGPEH GVKWTSRGEG EYTLETVDKP ERGTTIVLHL RDDHTDFAND WRLRSTIRKY SDHITFPVEM LKVPAPKADD AEEKTEETAE WERINDAQAL WVRPKSEITD DEYTEFYKHV GHDWEAPLAW THNRVEGKTE YTSLLYIPAR APFDLWDRES KQGVKLYVKR VFIMDDAEKL MPRYLRFVRG VIDSADLPLN VSREILQSNR VLDTIRQGSV KRVLGMLDQM ASNDAEKYAK FWGTFGQVLK EGVGEDFGNR EQIAGLLRFA STQAGSDEQN VSLKEVIGRM QEGQDEIYYI IADSYAAALA SPHLEIFRKK GIEVLLLWDR IDEWLMSQLT EFDGKKFKSV TRAELSLDEA AEDEPEAKET QDALVERLKK TLGDQVDDVR ISKRLVDSPA CLVTTEEEMS LHLQRLLKEA GQAAPTVKPI LEINPQHQLL QRAANETDDA RFEDIARVLL GQAALAEGGH LSDAADFVTR LNRLLV
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