Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1999 |
Symbol | |
ID | 8535158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2143151 |
End bp | 2145913 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646384381 |
Product | preprotein translocase, SecA subunit |
Protein accession | YP_003263868 |
Protein GI | 261856585 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.974197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCAA GTATTGTCCG GAAGATTTTT GGCACCCGTA ATGACCGCGT TATCAAGCAG ATGCAGCAAC GTGTCGGGCA GATCAATGCA CTGGAACCGC AGATGCAGGC ATTGGATGAT GCCGCGTTGC GTGCCAAGAC CGATGAGTTT CACCAGCGCT GGCAGAACGG TGAAACCCTG GATCAATTGC TGCCCGAAGC CTTTGCCGTT TGCCGGGAAA TGAGCCAGCG CGTGCTGGGC ATGCGCCATT TCGATGTGCA GCTGATCGGC GGCATGGCGT TGCATCAGGG CAAGATCGCG GAGATGCGAA CTGGTGAAGG CAAGACGCTG GTCGCCACCT TGGCGGTTTA TCTCAATGCC TTGACCAAGC AAGGCGTTCA TGTCGTCACC GTCAACGATT ACCTCGCCCG GCGTGATGCA GAGTGGATGG GGCGGCTCTA CAACGCGTTG GGCTTGTCTA TTGGCGTGGT TGTTCCGAAC ATGGACAACC GCAGCAAATA CGATGCCTAT CGTTGTGATG TGACCTATGC CACGAACAAC GAGCTCGGTT TCGATTATCT GCGTGACAAC ATGGCCTTCA GCCAAGACGC GGTCATGCAG CGCGAGTTGG TTTACGCCAT CGTCGATGAA GTGGATTCGA TCCTCATCGA TGAAGCACGC ACGCCCTTGA TTATTTCCGG CCCGGCGGCG GATTCTTCCG ATACTTATCT GAAAATCAAC GGGTTGATTC CCGAGCTCAA GAAGCAGGCG CGCGAAGAAC CCAAGGATGA CGAGCCGCCG TTAACCGACG AAGAACGCGG TGATTTCACC GTCGATGAAA AGAACAAACA GGTGTTTTTG ACCGAGCAAG GCTTCGAACG AGCGGAAAAC CTGCTGATTC AGATCGGTTT GCTGGAGCCG GGCGAGTCGC TCTATGACGC GCACAACATC ATGCTGTTGA GTCATTTGAA TTCCGCTCTG CGTGCGCATG CGATCTATCG TCGGAACGTG GAGTACATCG TTCGCGACAA CGAAGTGATC ATCGTCGATG AATTCACCGG GCGCACGCTT GCAGGACGCC GTTGGTCGGA AGGCTTGCAT CAAGCAGTCG AGGCCAAAGA AGGCCTGCCG ATTCAGCCGG AAAATCAGAC ACTGGCGTCC ATCACCTTCC AGAACTATTT CCGCCTGTAC AAAAAGCTAT CGGGTATGAC CGGTACGGCG GATACAGAAG CCCGCGAACT GGCTGAAATC TACAATTTGG AAGTGGTGCA AATTCCGACC AATCGCCCGG TGCAACGTAA CGATCTGGGC GATTTCGTCT TCCTCACGCA GGCGGAAAAA TACGAAGCCA TCGTCAAGGA TGTTCAGGCC GCCCGTGGCC GCAACCAGCC CACACTGGTC GGTACTGCTT CGATCGAGTC TTCCGAAATT ATTGCGGCGG CACTGACCAA GGCCAAGATT CCACACAACG TGCTGAACGC CAAGCATCAT GAGCGCGAGG CGGAGATCAT CGCCGAGGCC GGTCGTCCGG GCGCGGTAAC CATCGCCACC AACATGGCCG GTCGGGGTAC AGACATCATG CTGGGCGGGA ATCTGGAACA GGAAACGCTC GCACTGGGCA GCGATGCGAC GGAAGAAGAC AAAGCCAAGG TTAAGGCTGC CTGGCAAATC CGGCATGACG AAGCGCTGGC TGCGGGCGGC CTGCACGTGG TGGGTACGGA GCGGCATGAA TCCCGCCGGG TCGATAACCA GTTGCGTGGC CGTTCGGGTC GTCAGGGTGA TCCGGGCTCG ACCCGCTTCT TCCTGTCGTT GGAAGACAAC CTGATGCGCG TGTTCGCCTC CGATCGGGTC GGCGGCTTGA TGAAGAAACT GGGTATGCAA GCGGGCGAGG CAATCGAGCA TCCCTGGGTG ACCCGTGCCA TCGAGAACGC GCAGCGCAAG GTTGAAGGTC ATAACTTCGA CCAACGTAAG CACTTGCTTG ATTACGACAA CGTTGCCAAC GAACAGCGCA AGGTCATTTA CGATCAGCGC CGCGCCGTCA TGGCCACCAC AGAAACACAG GCGATCATCA TCCCGATGCG TCGCGAAGTC ATGGCCGATG TCTTCTCGCG GTTTGTGCCG CCAGAGGCAC TGGAAGAACA GTGGGATATC GAGGGTCTGA CCCAAACGCT TGCCGAAGAT TTCGGTCAGC AGATGCCGAT TGCCGAATGG CTGGCCACGG ACAAGGACCT CCATGCCGAG ACGTTGCTCG ACAAGATCAT TGACACCATG GAAGAGGATT ACAGCGTCAA GGAAACCATC GTGGGTGCGG ATTCTCTGCG CCAGTTCGAG AAAGGCATTC GGCTGCAAGT GCTCGATGGA CACTGGAAAG AACATCTCGC CGCGATGGAT TACCTCCGTC AAAGCATCGG TCTGCGCGGG TATGCACAGA AAAACCCGAC GCAGGAATAC AAGCGCGAAG CCTTCGAGAT GTTCAGCCAC ATGCTGGATG AAATCAATCT GGAAGTCGTG AAAATCCTGA GCCGTCTGTC CATCGCCCCG GCGCCCGATC AGGGCGAGGC AGTGATGGAT GACCTGCTTG AAGACGTGGT AGAAGCCCGG TATCTGGATG AAAGCCGGTT GCAGATGCGA CACGAGTCCG TGGATGAGTT TTCCGAATCA GCATCCGAGT CGGATGCCGA AGGCCGCACC CCCGTTCGTC AAGAACCGAA GCTGGGGCGT AACGATCCTT GCTGGTGTGG ATCGGGTAAA AAATATAAGC ACTGCCACGG AAAATTAAAT TAG
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Protein sequence | MIASIVRKIF GTRNDRVIKQ MQQRVGQINA LEPQMQALDD AALRAKTDEF HQRWQNGETL DQLLPEAFAV CREMSQRVLG MRHFDVQLIG GMALHQGKIA EMRTGEGKTL VATLAVYLNA LTKQGVHVVT VNDYLARRDA EWMGRLYNAL GLSIGVVVPN MDNRSKYDAY RCDVTYATNN ELGFDYLRDN MAFSQDAVMQ RELVYAIVDE VDSILIDEAR TPLIISGPAA DSSDTYLKIN GLIPELKKQA REEPKDDEPP LTDEERGDFT VDEKNKQVFL TEQGFERAEN LLIQIGLLEP GESLYDAHNI MLLSHLNSAL RAHAIYRRNV EYIVRDNEVI IVDEFTGRTL AGRRWSEGLH QAVEAKEGLP IQPENQTLAS ITFQNYFRLY KKLSGMTGTA DTEARELAEI YNLEVVQIPT NRPVQRNDLG DFVFLTQAEK YEAIVKDVQA ARGRNQPTLV GTASIESSEI IAAALTKAKI PHNVLNAKHH EREAEIIAEA GRPGAVTIAT NMAGRGTDIM LGGNLEQETL ALGSDATEED KAKVKAAWQI RHDEALAAGG LHVVGTERHE SRRVDNQLRG RSGRQGDPGS TRFFLSLEDN LMRVFASDRV GGLMKKLGMQ AGEAIEHPWV TRAIENAQRK VEGHNFDQRK HLLDYDNVAN EQRKVIYDQR RAVMATTETQ AIIIPMRREV MADVFSRFVP PEALEEQWDI EGLTQTLAED FGQQMPIAEW LATDKDLHAE TLLDKIIDTM EEDYSVKETI VGADSLRQFE KGIRLQVLDG HWKEHLAAMD YLRQSIGLRG YAQKNPTQEY KREAFEMFSH MLDEINLEVV KILSRLSIAP APDQGEAVMD DLLEDVVEAR YLDESRLQMR HESVDEFSES ASESDAEGRT PVRQEPKLGR NDPCWCGSGK KYKHCHGKLN
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