| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1976 |
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| Symbol | |
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| ID | 8535135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2110623 |
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| End bp | 2112623 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646384358 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_003263845 |
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| Protein GI | 261856562 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0132674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGC AACACGACAC GATGGCCTCC TTACTCATTT TATTGATCAT TTCGGTCGTC
GCCGTGGTCG GGCTTCGTCG TTTGCGCCTG CCCGCAATCC TGGGTTATCT CTTCGTGGGC
GTTGTCGCCG GCCCCTACAG CCTGGGCTGG ATCGGCGATG TCAAAGACAT TCACCTGATC
GCCGAATTCG GCGTGGTATT CCTGCTTTTC ATGCTTGGGC TGGAGTTCTC GCTGCCGCGC
CTGATCGCAA TGCGCCGCGC GGTCATGGGC ATGGGCGGCG CACAAGTTAT CGCCACGGCC
GTTGTGACCG GTGTCGCGGC CTGGCTGATG GGGTTTTCTC CTGCCGCCGC TTTCGTCCTG
GCCGGAGTGC TGACGGTTTC TTCCACCGCC ATCGTCATCA AGCAATTGGG TGAACAGCTG
GAGCTCAACA GCCGTCACGG CAACAACGCG GTCGGGGTGC TGTTGTTTCA GGATCTGGCG
GTCATCCCTT TTTTGATCAT CATCCCTGTT CTGGGTGTGC AAGCCGGAGA CGCGACGACC
GCGCAACTGA GCCTGAAGAT CGCCCTCACC ATTGCGGCCG GCATCATCGC CGCTGCCGCC
CTGTTTTTCG GCGGACGCTG GGTTCTGCGG CCACTGTTTC GGGAAATTGC GCGCGCCCGT
TCCGCCGAGC TGTTTACCAT TGCCGTGCTT TTGGTGGCTC TGGGTGCGGG CTGGCTGACC
AATCAGGTCG GATTATCTTA CGAGCTGGGC ACTTTTCTGG CGGGCATTGT GCTCTCCGAA
ACGCAATACA AGCATCAGAT CGAAACGGAT GTGCGGCCCT TCCGTGACGT ACTGCTCGGC
CTGTTTTTCA TCACCATCGG CATGATGCTG AATGTGCGCG AACTACCGGA CGTGTTTGTC
TGGGTCCTGC TGCTGCTGGG GCTGCTGGTG GTGATCAAGA CCAGCATCAT CTTCGTGATC
GGCCGGGCCA TGGGCGAAGA ACCGGGCGTT GCCTTGCGCA CGGGATTGGT GCTGGCGCAA
GGCGGCGAAT TCGGGTTCGC CATGCTCGCG ATCACCGCAC CGGAAATCAT GACCGACTAC
CAACGGCAGA TCGTGCTGGC AGTGGTTATT TTCTCGATGG TTTTGACACC AATCTTAATC
AAAATCAACG GCTTGATTGC CAAACACATG GTGCCGAGTT ATAAGAAAAA CCGAGCAGAG
CAGACCGAAG CGATTTCACA ATTCACCAAC GAGCTCAGTG GCCATGTGGT GATTTGCGGC
TTTGGCCGCG TAGGCCAGAA TGTCGCCCGG CTGCTGCAAA GCGAGGGATT TGAATACGCC
GCCATCGAAA TTGATCCGGA TATCGTGCAA CAGGCTCTGC AAGCTGGTCT GCCGGTGCAT
TTTGGCAACT CCACCCACGC AGATATTCTC GAAGCGGCCG GCTTGAGCCG CGCGCGCGCC
TTGGTTATTT CTCACCTCGA CGACAGTGCG GCCATCAAGA CGACCGAGGT GGCGCGCAGC
CTGGTCGCAA AGATTCCGAT CATGGTACGC GCCCGCACGG ACGAGCAACT CGATCCCCTC
TACGAAGCGG GTGCCACCGA TGTCGTGGCC AGCATCTACG AGATGAGTCT GGTGCTCTCG
GGCAATGTTT TACGTGCGCT GAACGTGCCG GTTTCCAAGG TCATCCGCCA GATTCAGGAA
ATCCGTCGGG AGAATTATGC ACCTCTCAGG CACACCTATG CGGGCAACCG CGCTCGTGAC
AGCAACGATT TCATCCCGCT CGCGCCGCGG ACCCTGCGCA ACATTTCACT GGTTGAAGGT
GCGTTCGCCA TTGGTCGAAC GCTAGAGGGC TGCCTGCCCA GCAATAAAAC CATTGTGGTC
GACGCCATTA ATCGATCCGG GATTCGCGGC GAAACCCCGC AGAGCGATAC TGTGCTGCAG
CAAGGCGACA CGCTCACGCT CTACGGCGCG CCCGAGGAGC TCGACAGCGC GGAACATTTC
CTGCTCTCCG GCAGGGAGTG A
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| Protein sequence | MTMQHDTMAS LLILLIISVV AVVGLRRLRL PAILGYLFVG VVAGPYSLGW IGDVKDIHLI
AEFGVVFLLF MLGLEFSLPR LIAMRRAVMG MGGAQVIATA VVTGVAAWLM GFSPAAAFVL
AGVLTVSSTA IVIKQLGEQL ELNSRHGNNA VGVLLFQDLA VIPFLIIIPV LGVQAGDATT
AQLSLKIALT IAAGIIAAAA LFFGGRWVLR PLFREIARAR SAELFTIAVL LVALGAGWLT
NQVGLSYELG TFLAGIVLSE TQYKHQIETD VRPFRDVLLG LFFITIGMML NVRELPDVFV
WVLLLLGLLV VIKTSIIFVI GRAMGEEPGV ALRTGLVLAQ GGEFGFAMLA ITAPEIMTDY
QRQIVLAVVI FSMVLTPILI KINGLIAKHM VPSYKKNRAE QTEAISQFTN ELSGHVVICG
FGRVGQNVAR LLQSEGFEYA AIEIDPDIVQ QALQAGLPVH FGNSTHADIL EAAGLSRARA
LVISHLDDSA AIKTTEVARS LVAKIPIMVR ARTDEQLDPL YEAGATDVVA SIYEMSLVLS
GNVLRALNVP VSKVIRQIQE IRRENYAPLR HTYAGNRARD SNDFIPLAPR TLRNISLVEG
AFAIGRTLEG CLPSNKTIVV DAINRSGIRG ETPQSDTVLQ QGDTLTLYGA PEELDSAEHF
LLSGRE
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