| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1959 |
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| Symbol | |
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| ID | 8535117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2095815 |
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| End bp | 2097104 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646384340 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_003263828 |
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| Protein GI | 261856545 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00121653 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAC AAGTCTGCTT TGCGACGATG CAGTTTGATG AGCCCTGGAC GCTTGAGAGT
TACCTCAAGA CCGGAGGCTA TTCGGCCTGG CGCAAAATCC TGGCCGAAAA AACCGATCCC
GCACTGATTA TCGAAGAACT GAAAACCTCA AACCTTCGCG GTAGAGGCGG TGCGGGCTTC
CCGACCGGCC TCAAATGGTC CTTCATGCCG CGCAATGCGC CCGGTCAGAA GTATGTCGTT
TGCAACTCGG ATGAGTCCGA GCCGGGTACT GCGAAAGATC GTCAGATTTT GCTTAATAAT
CCTCATGCTC TGGTGGAAGG CATGGCGATT GCGGGTTACA CCATTGGCGC CACGGTGGGT
TACAACTACA TGCGCGGCGA GTTCACCGAC TTGGTGTTCC GCCGTTTTGA AACCGCGGTC
AAGGAAGCGT ACGAGTTGGG CTTGCTGGGC AAAAATCTGC AAGGCTCCGG CATTGATTTC
GATCTGTACG GCTCGTTGGG CGCCGGCGCC TACATCTGCG GGGAAGAGAC GGCCTTACTC
GAATCTCTGG AAGGCAAGAA AGGCCAACCG CGATTCAAGC CCCCGTTCCC GGCAAATTTT
GGTTTGTACG GACGTCCGAC CACGGTAAAC AACACCGAAA CACTGTCGTC GGTTCCCGCC
ATCATGCGCA ACGGCGGCCA GTGGTTTGCG GACTTGGGCG TGCCGAACAG CGGCGGCCTC
AAGTTGTTCT CGGTTTCAGG TCATGTGAAC AAGCCGGGTG TCTTTGAAAT CCCCATGGGT
TTACCCTTCA GTGAACTGCT GTCCATGGCC GGTGGCGTAC GCGAAGGTCG CAAGCTCAAG
GCGGTGATCC CGGGCGGTAC CTCTACTCCG GTAGTGCCGG GTTCCGTGAT GATGCAGACC
AACATGGATT ATGACTCGAT CGCCAAATCA GGCACGTTCC TTGGTTCGGG CGGCCTGATC
GTGATCGATG ACTCGGCATG CATGGTCGAA GCCTTGCGCC GCATTTCTCG CTTCTACTAT
TCGGAGTCAT GCGGTCAATG CACGCCCTGC CGTGAGGGTA CTGGTTGGCT TTACCGGATG
CTCACCCGCG TTGTTGAAGG CAAAGGCGCC ATGGCCGATT TGAACCGATT GGATGATGTG
GCCAGCAAGA TCGAAGGGCG AACCATTTGT GCGTTGGGCG ATGCGGCCGC CGTTCCTGTG
CGGAGCTTCC TTAAGCATTT CCGTCACGAA TTTGAATATT ACATCGAGCA TGGCCACAGC
ATGATTGCTG ACGGTTTGGC GACGGTCTAA
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| Protein sequence | MTEQVCFATM QFDEPWTLES YLKTGGYSAW RKILAEKTDP ALIIEELKTS NLRGRGGAGF
PTGLKWSFMP RNAPGQKYVV CNSDESEPGT AKDRQILLNN PHALVEGMAI AGYTIGATVG
YNYMRGEFTD LVFRRFETAV KEAYELGLLG KNLQGSGIDF DLYGSLGAGA YICGEETALL
ESLEGKKGQP RFKPPFPANF GLYGRPTTVN NTETLSSVPA IMRNGGQWFA DLGVPNSGGL
KLFSVSGHVN KPGVFEIPMG LPFSELLSMA GGVREGRKLK AVIPGGTSTP VVPGSVMMQT
NMDYDSIAKS GTFLGSGGLI VIDDSACMVE ALRRISRFYY SESCGQCTPC REGTGWLYRM
LTRVVEGKGA MADLNRLDDV ASKIEGRTIC ALGDAAAVPV RSFLKHFRHE FEYYIEHGHS
MIADGLATV
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