Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1927 |
Symbol | |
ID | 8535085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2060851 |
End bp | 2062635 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646384308 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003263796 |
Protein GI | 261856513 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.118281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAG AAAACACCAT CCTATTTTCC GATTTTGCCC TTGCTGCACC CTTGCTGCGA TCGGTCGAAG AACTGGGCTA CGAAAGCCCA TCACCCATCC AAGCCAAAAG CATTCCCGTC CTGCTGGAAG GCAAAGACGT GCTGGGCATG GCGCAAACCG GCACCGGCAA AACCGGTGCG TTCGCCCTGC CTTTGCTGAG CCGGATCGAC ATCAATCTGC GCGCACCCCA ATTGTTGGTT CTGGCGCCAA CACGTGAACT GGCAATCCAG GTCGCCGAAG CCATGCAGGC CTACGCCCGC CACTTGCCTG ATTTCCATGT TCTGCCCGTC TACGGCGGAC AAGCGATGGA ACCTCAGCTG CGCGGCCTGA AACGCGGCGT ACACGTCGTG GTCGGCACAC CGGGTCGCAT CCAGGATCAC ATCAAGCGCG GCACGCTCAA ACTCAATCAA ATCCAGGCTG TTGTACTGGA TGAAGCCGAC GAAATGCTGC GCATGGGCTT TATCGATGAC GTCGATGAAA TCTTGAGCAA AACACCGGCC AACCGTCAGG TCGCACTGTT CTCCGCCACC ATGCCGGATC AGATTCGCCG CATTGCCCAA CGGCATCTGC GCAACCCGGT CGAAATTGCG ATCAAATCCA GCACCTCGAC CGTCAAGGCC ATCAACCAGC GGTATTGGGC CGTCAGCGGC ATGCACAAAT TGGATGCGCT GACCCGCATT CTGGAAGTCG AAGAATTTGA CGCGGTGATC ATTTTCGTGC GCACCAAAGT GGCCACCACC GAACTGGCCG AAAAACTGGA AGCGCGCGGC TATGCTGCCT CTCCGTTGAA TGGCGACATG AATCAGGCCA TGCGTGAAAA GGCAATCGAT CGCCTCAAGC GCGGATCACT CGATATCATC ATCGCGACCG ACGTGGCCGC ACGCGGTATT GATGTGGCGC GTGTCAGCCA TGTCGTGAAC TACGACATCC CTCTGGATAC CGAATCGTAT GTGCACCGCA TCGGCCGTAC CGGTCGTGCC GGTCGTTCCG GCGAGGCCAT CCTGTTCGTC GCCCCACGCG AAAAGCGCAT GCTGGGCGCC ATCGAACGCG CTACCGGGCA ATTGATCACC CCCATGCGCC TGCCGAGCCA GAGCGATATC GCGGACAAAC GCTCTGCCGC GTTCAAGAAC CAGATCAGCG AAGCGATGGA ATCTCAGGAT CTGGCCTTCT TCGAGACCCT GATCGAGGAA TACCAGTCCG AACACGACGT CGGCCTGTCG GAAATCGCAG CCGCGTTGGC CTATTTGGCA CAAAAGGACC GTCCTCTGCT GCCGGCCGAA ATCAAGGAAA CGGCGCAAGT CGGCTTTGGC GACCGCCAGG ATCGCGGCCA AGGTCGTGAT CAGGATCGTC GCGACGAGCC CCGCCGTCCC CGTCAGAACG ATGACATGGC CCGTGTGAAA TACCGGATCG AAATCGGCCA CGAGCATGGC GTCCAACCGA AGAACATCGT CGGCGCACTT GCCAACGAAG CCGGCATCGA CAGCAAATAT ATCGGCGCGA TTCGCATTTT CGACAGCCAC AGCACCGTTG ACTTGCCCGA AGGCATGCCG AACGAAGTCT TTACCCAGCT CAAACGTCTG CATGTATTGG GCATACCGCT CGAGATCAGC GAAGCTGCCC CGGGAGACAG TGAAGGCGAG CGCAGCGGCA ACCGCCGCCC ACCGGCCGGC CCGCGCAAAT TCGGCCCTCG TGGTGGTGGT GATTCCTTCG GCGGCAAACC CCGTCGCTCG AAACCACGCA GCTAA
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Protein sequence | MSEENTILFS DFALAAPLLR SVEELGYESP SPIQAKSIPV LLEGKDVLGM AQTGTGKTGA FALPLLSRID INLRAPQLLV LAPTRELAIQ VAEAMQAYAR HLPDFHVLPV YGGQAMEPQL RGLKRGVHVV VGTPGRIQDH IKRGTLKLNQ IQAVVLDEAD EMLRMGFIDD VDEILSKTPA NRQVALFSAT MPDQIRRIAQ RHLRNPVEIA IKSSTSTVKA INQRYWAVSG MHKLDALTRI LEVEEFDAVI IFVRTKVATT ELAEKLEARG YAASPLNGDM NQAMREKAID RLKRGSLDII IATDVAARGI DVARVSHVVN YDIPLDTESY VHRIGRTGRA GRSGEAILFV APREKRMLGA IERATGQLIT PMRLPSQSDI ADKRSAAFKN QISEAMESQD LAFFETLIEE YQSEHDVGLS EIAAALAYLA QKDRPLLPAE IKETAQVGFG DRQDRGQGRD QDRRDEPRRP RQNDDMARVK YRIEIGHEHG VQPKNIVGAL ANEAGIDSKY IGAIRIFDSH STVDLPEGMP NEVFTQLKRL HVLGIPLEIS EAAPGDSEGE RSGNRRPPAG PRKFGPRGGG DSFGGKPRRS KPRS
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